RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.09□□□□□ -1.27
TDP1-213ENST00000555880 GOLGA8TH3BQL2 631 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 NRG2O14511 850 aaPredicted RBP7.09□□□□□ -1.27
TDP1-213ENST00000555880 PTGESO14684 152 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 CASQ2O14958 399 aaPredicted RBP7.09□□□□□ -1.27
TDP1-213ENST00000555880 FGF10O15520 208 aaPredicted RBP7.09□□□□□ -1.27
TDP1-213ENST00000555880 PHGDHO43175 533 aaKnown RBP7.09□□□□□ -1.27
TDP1-213ENST00000555880 TREHO43280 583 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 LRIG2O94898 1065 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 THP07101 528 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 CHRNGP07510 517 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 MYL3P08590 195 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 VCLP18206 1134 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 TFEBP19484 476 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 EPHA3P29320 983 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 GLRBP48167 497 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 NAGLUP54802 743 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 AQP4P55087 323 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 RAB10P61026 200 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 ART3Q13508 389 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 PEX6Q13608 980 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 ARL13AQ5H913 290 aaPredicted RBP7.09□□□□□ -1.27
TDP1-213ENST00000555880 THEMIS2Q5TEJ8 643 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 SPRYD7Q5W111 196 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 LPCAT4Q643R3 524 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 LRRC8EQ6NSJ5 796 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 PKN3Q6P5Z2 889 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 ATG14Q6ZNE5 492 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 GPRIN1Q7Z2K8 1008 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 KBTBD6Q86V97 674 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 METTL23Q86XA0 190 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 TMEM126BQ8IUX1 230 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.09□□□□□ -1.27
TDP1-213ENST00000555880 CPSF7Q8N684 471 aaKnown RBP7.09□□□□□ -1.27
TDP1-213ENST00000555880 CCNYL1Q8N7R7 359 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 ARRDC4Q8NCT1 418 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 MAPK15Q8TD08 544 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 PPP1R13LQ8WUF5 828 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 STYXQ8WUJ0 223 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 PDCD6IPQ8WUM4 868 aaKnown RBP7.09□□□□□ -1.27
TDP1-213ENST00000555880 ZFAND2BQ8WV99 257 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 BRI3BPQ8WY22 251 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 CELF6Q96J87 481 aaKnown RBP7.09□□□□□ -1.27
TDP1-213ENST00000555880 PPP1R36Q96LQ0 422 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 ZFP42Q96MM3 310 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 TSGA13Q96PP4 275 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 DDX50Q9BQ39 737 aaKnown RBP7.09□□□□□ -1.27
TDP1-213ENST00000555880 MCMBPQ9BTE3 642 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 FSD1LQ9BXM9 530 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 AP5M1Q9H0R1 490 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 WDR55Q9H6Y2 383 aaPredicted RBP7.09□□□□□ -1.27
TDP1-213ENST00000555880 EFCAB1Q9HAE3 211 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 NCKIPSDQ9NZQ3 722 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 DTNAQ9Y4J8 743 aa7.09□□□□□ -1.27
TDP1-213ENST00000555880 A0A087X1B8 175 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 FAM95CA0A1B0GW59 222 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 CCDC78A2IDD5 438 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 MYBPHLA2RUH7 354 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 RNASEH1O60930 286 aaKnown RBP7.09□□□□□ -1.28
TDP1-213ENST00000555880 TADA2AO75478 443 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 SORBS2O94875 1100 aaKnown RBP7.09□□□□□ -1.28
TDP1-213ENST00000555880 VAPBO95292 243 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 F7P08709 466 aaPredicted RBP7.09□□□□□ -1.28
TDP1-213ENST00000555880 SLC35E2BP0CK96 405 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 ODC1P11926 461 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 CCNCP24863 283 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 HTR7P34969 479 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 AVPR1AP37288 418 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 ALDH1A3P47895 512 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 GEMP55040 296 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 DYNC1I2Q13409 638 aaKnown RBP7.09□□□□□ -1.28
TDP1-213ENST00000555880 IRF5Q13568 498 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 POU6F1Q14863 301 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 CNGA3Q16281 694 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 FAM110CQ1W6H9 321 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 LSM12Q3MHD2 195 aaKnown RBP7.09□□□□□ -1.28
TDP1-213ENST00000555880 SFT2D3Q587I9 215 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 KIAA0319Q5VV43 1072 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 AP1ARQ63HQ0 302 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 CWF19L1Q69YN2 538 aaKnown RBP7.09□□□□□ -1.28
TDP1-213ENST00000555880 OTOP3Q7RTS5 596 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 PIWIL4Q7Z3Z4 852 aaKnown RBP7.09□□□□□ -1.28
TDP1-213ENST00000555880 SLC41A1Q8IVJ1 513 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 CNTN4Q8IWV2 1026 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 DSELQ8IZU8 1212 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 PQLC1Q8N2U9 271 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 LZTR1Q8N653 840 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 IPMKQ8NFU5 416 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 SHKBP1Q8TBC3 707 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 USP33Q8TEY7 942 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 KCTD4Q8WVF5 259 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 DLG3Q92796 817 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 CCDC126Q96EE4 140 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 FAR2Q96K12 515 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 CDRT15Q96T59 188 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 MRPL57Q9BQC6 102 aaKnown RBP7.09□□□□□ -1.28
TDP1-213ENST00000555880 C1QTNF1Q9BXJ1 281 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 NUF2Q9BZD4 464 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 OSBPL2Q9H1P3 480 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 MRPL46Q9H2W6 279 aaKnown RBP7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms