RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ENC1O14682 589 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 ATMINO43313 823 aaPredicted RBP14.04□□□□□ -0.16
PCNX4-209ENST00000555569 BUB1O43683 1085 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 AP1G1O43747 822 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 THEGLP0DJG4 465 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 GKP32189 559 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 PRKCIP41743 596 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 YBEYP58557 167 aaPredicted RBP14.04□□□□□ -0.16
PCNX4-209ENST00000555569 MAMLD1Q13495 774 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 TMEM259Q4ZIN3 620 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 CCDC157Q569K6 752 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 E4F1Q66K89 784 aaPredicted RBP14.04□□□□□ -0.16
PCNX4-209ENST00000555569 SEL1L3Q68CR1 1132 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 PLEKHA7Q6IQ23 1121 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 KIAA1161Q6NSJ0 714 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 PARS2Q7L3T8 475 aaKnown RBP14.04□□□□□ -0.16
PCNX4-209ENST00000555569 TMPRSS7Q7RTY8 843 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 ZNF571Q7Z3V5 609 aaPredicted RBP14.04□□□□□ -0.16
PCNX4-209ENST00000555569 EID2Q8N6I1 236 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 OR2AP1Q8NGE2 309 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 OR6K2Q8NGY2 324 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 LRIG1Q96JA1 1093 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 FEM1CQ96JP0 617 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 CNDP2Q96KP4 475 aaKnown RBP14.04□□□□□ -0.16
PCNX4-209ENST00000555569 EDEM3Q9BZQ6 932 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 FADS3Q9Y5Q0 445 aa14.04□□□□□ -0.16
PCNX4-209ENST00000555569 ACACAQ13085 2346 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 RASA4BC9J798 803 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 KRIT1O00522 736 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 FGF10O15520 208 aaPredicted RBP14.03□□□□□ -0.16
PCNX4-209ENST00000555569 RASA4O43374 803 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 TMCC1O94876 653 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 POP4O95707 220 aaKnown RBP14.03□□□□□ -0.16
PCNX4-209ENST00000555569 SERPINC1P01008 464 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 FTLP02792 175 aaPredicted RBP14.03□□□□□ -0.16
PCNX4-209ENST00000555569 GZMAP12544 262 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 PSMA2P25787 234 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 HTR7P34969 479 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 RPS21P63220 83 aaKnown RBP14.03□□□□□ -0.16
PCNX4-209ENST00000555569 KLHL30Q0D2K2 578 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 MYLK3Q32MK0 819 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 ZNF805Q5CZA5 627 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 ATXN7L2Q5T6C5 722 aaPredicted RBP14.03□□□□□ -0.16
PCNX4-209ENST00000555569 KANSL1Q7Z3B3 1105 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 DNAAF5Q86Y56 855 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 GALNT15Q8N3T1 639 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 CASKIN2Q8WXE0 1202 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 RAB7BQ96AH8 199 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 HMCESQ96FZ2 354 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 GDAP1L1Q96MZ0 367 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 SLC17A9Q9BYT1 436 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 TTYH3Q9C0H2 523 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 KLC2Q9H0B6 622 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 GPATCH2LQ9NWQ4 482 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 ASPMQ8IZT6 3477 aa14.03□□□□□ -0.16
PCNX4-209ENST00000555569 C16orf96A6NNT2 1141 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 DDX3XO00571 662 aaKnown RBP eCLIP14.02□□□□□ -0.176e-7■■□□□ 14.3
PCNX4-209ENST00000555569 UGT2B4P06133 528 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 ABL2P42684 1182 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 CLDN2P57739 230 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 TPI1P60174 286 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 RAD51Q06609 339 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 SERINC3Q13530 473 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 FGL2Q14314 439 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 NR1I3Q14994 352 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 PARP15Q460N3 678 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 INO80DQ53TQ3 878 aaPredicted RBP14.02□□□□□ -0.17
PCNX4-209ENST00000555569 GCNT7Q6ZNI0 430 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 ABI3BPQ7Z7G0 1075 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 ZSCAN30Q86W11 494 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 UMODL1-AS1Q8N2C9 162 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 OR13H1Q8NG92 308 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 FAM174AQ8TBP5 190 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 CALN1Q9BXU9 219 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 OSBPL1AQ9BXW6 950 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 CBX8Q9HC52 389 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 KLHL11Q9NVR0 708 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 DONSONQ9NYP3 566 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 CNOT8Q9UFF9 292 aaKnown RBP14.02□□□□□ -0.17
PCNX4-209ENST00000555569 AP4E1Q9UPM8 1137 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 PCDHGA1Q9Y5H4 931 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 HS3ST3A1Q9Y663 406 aa14.02□□□□□ -0.17
PCNX4-209ENST00000555569 ANKRD11Q6UB99 2663 aaPredicted RBP14.02□□□□□ -0.17
PCNX4-209ENST00000555569 PKD1L2Q7Z442 2459 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 APC2O95996 2303 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 SYCE3A1L190 88 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 TMEM191CA6NGB0 347 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 SRRM3A6NNA2 597 aaPredicted RBP14.01□□□□□ -0.17
PCNX4-209ENST00000555569 A6NNZ2 444 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 EIF3CLB5ME19 914 aaKnown RBP14.01□□□□□ -0.17
PCNX4-209ENST00000555569 NEMP1O14524 444 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 TSPAN6O43657 245 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 SDC3O75056 442 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 RNF8O76064 485 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 IGSF6O95976 241 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 PAK4O96013 591 aaPredicted RBP14.01□□□□□ -0.17
PCNX4-209ENST00000555569 SKILP12757 684 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 RHOAP61586 193 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 TPM4P67936 248 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 FANCCQ00597 558 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms