RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 A0A1B0GVM2 712 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 DYTNA2CJ06 578 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 DDTLA6NHG4 134 aaPredicted RBP3.76□□□□□ -1.81
SNX6-204ENST00000555541 C17orf100A8MU93 164 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 ACKR2O00590 384 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 ITM2AO43736 263 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 SETSIPP0DME0 302 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 LYL1P12980 280 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 CLCNKBP51801 687 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 ACSM2AQ08AH3 577 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 HDAC1Q13547 482 aaPredicted RBP3.76□□□□□ -1.81
SNX6-204ENST00000555541 PUM3Q15397 648 aaKnown RBP3.76□□□□□ -1.81
SNX6-204ENST00000555541 MARK2Q7KZI7 788 aaKnown RBP3.76□□□□□ -1.81
SNX6-204ENST00000555541 PTGR2Q8N8N7 351 aaPredicted RBP3.76□□□□□ -1.81
SNX6-204ENST00000555541 ATG16L2Q8NAA4 619 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 TMEM18Q96B42 140 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 C3orf49Q96BT1 292 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 BICD1Q96G01 975 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 SCMH1Q96GD3 660 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 RMDN3Q96TC7 470 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.76□□□□□ -1.81
SNX6-204ENST00000555541 TMLHEQ9NVH6 421 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 BAG5Q9UL15 447 aa3.76□□□□□ -1.81
SNX6-204ENST00000555541 SAA2-SAA4A0A096LPE2 208 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 FAM90A20PA6NIJ5 464 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 XPNPEP2O43895 674 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 CHN1P15882 459 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 C21orf33P30042 268 aaPredicted RBP3.75□□□□□ -1.81
SNX6-204ENST00000555541 CXCR3P49682 368 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 STPG1Q5TH74 334 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 SULT6B1Q6IMI4 303 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 RHBDF2Q6PJF5 856 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 GALNT7Q86SF2 657 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 CCDC117Q8IWD4 279 aaPredicted RBP3.75□□□□□ -1.81
SNX6-204ENST00000555541 STT3BQ8TCJ2 826 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 DDX23Q9BUQ8 820 aaKnown RBP3.75□□□□□ -1.81
SNX6-204ENST00000555541 IFT27Q9BW83 186 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 CADM1Q9BY67 442 aaKnown RBP3.75□□□□□ -1.81
SNX6-204ENST00000555541 ZNF700Q9H0M5 742 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 DACT1Q9NYF0 836 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 KLQ9UEF7 1012 aa3.75□□□□□ -1.81
SNX6-204ENST00000555541 ABHD14A-ACY1A0A1B0GW23 586 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 SYN3O14994 580 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 CCNT1O60563 726 aaKnown RBP3.74□□□□□ -1.81
SNX6-204ENST00000555541 LDLRP01130 860 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 CYP4B1P13584 511 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 AVPR2P30518 371 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 HTR3AP46098 478 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 BRWD1-AS2P59051 145 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 ICA1Q05084 483 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 LRRC24Q50LG9 513 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 TANGO2Q6ICL3 276 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 AADACL2Q6P093 401 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 RRAGAQ7L523 313 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 WDR5BQ86VZ2 330 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 BRSK2Q8IWQ3 736 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 OTUD7AQ8TE49 926 aaPredicted RBP3.74□□□□□ -1.81
SNX6-204ENST00000555541 TEFMQ96QE5 360 aaKnown RBP3.74□□□□□ -1.81
SNX6-204ENST00000555541 CRB3Q9BUF7 120 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 NPFFR1Q9GZQ6 430 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 CLPBQ9H078 707 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 LRFN1Q9P244 771 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 UPB1Q9UBR1 384 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 KCND3Q9UK17 655 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 GAB2Q9UQC2 676 aa3.74□□□□□ -1.81
SNX6-204ENST00000555541 TARSL2A2RTX5 802 aaKnown RBP3.73□□□□□ -1.81
SNX6-204ENST00000555541 J3KR12 359 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 EYA2O00167 538 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 PLIN1O60240 522 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 SERPINB2P05120 415 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 MMP3P08254 477 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 ACP5P13686 325 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 ANOS1P23352 680 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 DCTDP32321 178 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 KRT2P35908 639 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 RPS6KA3P51812 740 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 RBBP5Q15291 538 aaKnown RBP3.73□□□□□ -1.81
SNX6-204ENST00000555541 FAM69BQ5VUD6 431 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 TMEM268Q5VZI3 342 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 PMS2CLQ68D20 193 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 EXOC3L1Q86VI1 746 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 PALB2Q86YC2 1186 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 SCAIQ8N9R8 606 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 LMNTD1Q8N9Z9 388 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 TXNDC15Q96J42 360 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 TRAPPC9Q96Q05 1148 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 LHPPQ9H008 270 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 MMP28Q9H239 520 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 ACAD9Q9H845 621 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 MALT1Q9UDY8 824 aa3.73□□□□□ -1.81
SNX6-204ENST00000555541 H0Y3Z8 333 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 CSTBP04080 98 aaKnown RBP3.72□□□□□ -1.81
SNX6-204ENST00000555541 ARSAP15289 507 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 AMD1P17707 334 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 RFC1P35251 1148 aaPredicted RBP3.72□□□□□ -1.81
SNX6-204ENST00000555541 DPP6P42658 865 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 VEGFCP49767 419 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 CYP4A11Q02928 519 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 FOXO1Q12778 655 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms