RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 POP4O95707 220 aaKnown RBP12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 SYPP08247 313 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 CD48P09326 243 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 TMEM253P0C7T8 217 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 GJC1P36383 396 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 CCR5P51681 352 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 GEMIN4P57678 1058 aaKnown RBP12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 GRIK2Q13002 908 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 MESDQ14696 234 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 PRAMEF14Q5SWL7 426 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ERN2Q76MJ5 926 aaKnown RBP12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 RABEPKQ7Z6M1 372 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 PLPP6Q8IY26 295 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 MINDY1Q8N5J2 469 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 SLC6A18Q96N87 628 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 CSPG4P5Q96PW8 444 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 UVRAGQ9P2Y5 699 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 TFR2Q9UP52 801 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 KNL1Q8NG31 2342 aa12.62□□□□□ -0.39
TRAPPC6B-205ENST00000555269 TNRC6BQ9UPQ9 1833 aaKnown RBP12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 CXorf51AA0A1B0GTR3 108 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ZSCAN5CA6NGD5 496 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ARHGAP42A6NI28 874 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 H3BRJ5 948 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 GIPC1O14908 333 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 PRAMEF11O60813 436 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 RNGTTO60942 597 aaKnown RBP12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 GSRP00390 522 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 WNT1P04628 370 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ARL4AP40617 200 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ARSEP51690 589 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 AFF3P51826 1226 aaKnown RBP12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 CDH6P55285 790 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 RHOAP61586 193 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 SNRPD1P62314 119 aaKnown RBP12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 HADHQ16836 314 aaKnown RBP12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 KIF19Q2TAC6 998 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 HLA-BQ31612 363 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 INO80DQ53TQ3 878 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 PPM1JQ5JR12 505 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 KCTD6Q8NC69 237 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 OR2AP1Q8NGE2 309 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 TEKT4Q8WW24 435 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 TSC1Q92574 1164 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 MRFAP1L1Q96HT8 127 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 EXOC2Q96KP1 924 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 KLHL32Q96NJ5 620 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 HDAC8Q9BY41 377 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 PDFQ9HBH1 243 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 DYRK4Q9NR20 520 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 KLHL11Q9NVR0 708 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 DONSONQ9NYP3 566 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 LHX3Q9UBR4 397 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 UBA2Q9UBT2 640 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 CA5BQ9Y2D0 317 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ANKRD6Q9Y2G4 727 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 SNX11Q9Y5W9 270 aa12.61□□□□□ -0.39
TRAPPC6B-205ENST00000555269 TTC24A2A3L6 582 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 C16orf96A6NNT2 1141 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 SLC31A1O15431 190 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 SLC7A4O43246 635 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 LATO43561 262 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 BUB1BO60566 1050 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 PALMO75781 387 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 PCDH8O95206 1070 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 KCNK5O95279 499 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 UGT2B4P06133 528 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 CD59P13987 128 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ITIH2P19823 946 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 RGRP47804 291 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 RACK1P63244 317 aaKnown RBP12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 KRT81Q14533 505 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 FBXL19Q6PCT2 694 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ERMP1Q7Z2K6 904 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 PRPF39Q86UA1 669 aaKnown RBP12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 CASKIN2Q8WXE0 1202 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 SERAC1Q96JX3 654 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 KDM4CQ9H3R0 1056 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 GAREM1Q9H706 876 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 AASDHPPTQ9NRN7 309 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 IPO11Q9UI26 975 aaKnown RBP12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ZFR2Q9UPR6 939 aaKnown RBP12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 SPTBN2O15020 2390 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ADAMTS9Q9P2N4 1935 aa12.6□□□□□ -0.39
TRAPPC6B-205ENST00000555269 A0A1W2PQU0 124 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 A0A1W2PR77 199 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 MUSKO15146 869 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 OPHN1O60890 802 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 GJB3O75712 270 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ADRB3P13945 408 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 TIMP2P16035 220 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 PRLRP16471 622 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ITGB7P26010 798 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 MAGEA1P43355 309 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ZNF135P52742 658 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 DPYSL3Q14195 570 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 TEAD4Q15561 434 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ZNF284Q2VY69 593 aa12.59□□□□□ -0.39
TRAPPC6B-205ENST00000555269 ZNF805Q5CZA5 627 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms