RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SPIRE1Q08AE8 756 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 DCTN2Q13561 401 aaKnown RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF677Q86XU0 584 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 TDRPQ86YL5 185 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 ZZZ3Q8IYH5 903 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 GPR135Q8IZ08 494 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 CADM2Q8N3J6 435 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 GAS2L1Q99501 681 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 NR2E3Q9Y5X4 410 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 OR10H3O60404 316 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PLIN3O60664 434 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 TCF4P15884 667 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 MECP2P51608 486 aaKnown RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 MTA1Q13330 715 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 ADRM1Q16186 407 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PUS10Q3MIT2 529 aaKnown RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 SLC47A2Q86VL8 602 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 C2orf73Q8N5S3 287 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 MTG1Q9BT17 334 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 CST11Q9H112 138 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 FBXO28Q9NVF7 368 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 MYH14Q7Z406 1995 aaKnown RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 FAM172BPA6NC97 362 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 C1QTNF3-AMACRE9PGA6 284 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 MAFKO60675 156 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 MICAL2O94851 1124 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PRKAR1AP10644 381 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 HSD3B1P14060 373 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 CRABP2P29373 138 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 GAL3ST4Q96RP7 486 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 CXorf56Q9H5V9 222 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 GATBO75879 557 aaKnown RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 PLGP00747 810 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 VIL1P09327 827 aaKnown RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CALB2P22676 271 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CXCR2P25025 360 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SLC26A3P40879 764 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 AP1S1P61966 158 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 HSDL1Q3SXM5 330 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ERO1BQ86YB8 467 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ARMC10Q8N2F6 343 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 TAS2R13Q9NYV9 303 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 GAKO14976 1311 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 A0A1W2PQ72 361 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 KCNQ2O43526 872 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CYP17A1P05093 508 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ERVK-9P63128 1117 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 FRG1Q14331 258 aaKnown RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 RETSATQ6NUM9 610 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SPOCD1Q6ZMY3 1216 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 NAT16Q8N8M0 369 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 AGPAT3Q9NRZ7 376 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ERVK-11Q9UQG0 969 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 A0A1W2PQC6 194 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 IFNGP01579 166 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SRGNP10124 158 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 BEX3Q00994 111 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CRY2Q49AN0 593 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 FNBP1LQ5T0N5 605 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SCIMPQ6UWF3 145 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 LRRC17Q8N6Y2 441 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 PSMA8Q8TAA3 256 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 GAL3ST1Q99999 423 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 PHF20Q9BVI0 1012 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 NECTIN3Q9NQS3 549 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ABI3Q9P2A4 366 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ING4Q9UNL4 249 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 OVOS2A0A0G2JMS6 1433 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 OVOS2A0A0J9YW53 1432 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 OVOS2Q6IE36 1432 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ATP7BP35670 1465 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SLC28A1O00337 649 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 GNRH1P01148 92 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ICAM1P05362 532 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 NPR3P17342 541 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 PERM1Q5SV97 790 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF549Q6P9A3 640 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 PANX3Q96QZ0 392 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 FAM126AQ9BYI3 521 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 HCN3Q9P1Z3 774 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 STARD13Q9Y3M8 1113 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 MAPKBP1O60336 1514 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CDH8P55286 799 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CPSF1Q10570 1443 aaKnown RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 EXOC3L1Q86VI1 746 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SELENOMQ8WWX9 145 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 COX4I2Q96KJ9 171 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF285Q96NJ3 590 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 C9orf16Q9BUW7 83 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 MRPL17Q9NRX2 175 aaKnown RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ANKEF1Q9NU02 776 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SPAG17Q6Q759 2223 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SLC9A3R1O14745 358 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SGTAO43765 313 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ERAL1O75616 437 aaKnown RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 LCA5LO95447 670 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SPATA31D3P0C874 917 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 FSCN1Q16658 493 aaKnown RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SPATA31D4Q6ZUB0 917 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 PHYKPLQ8IUZ5 450 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms