RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 WFDC5Q8TCV5 224 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 MGARPQ8TDB4 240 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 SEC16BQ96JE7 1060 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 AGAP2Q99490 1192 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 KLF6Q99612 283 aaPredicted RBP9.02□□□□□ -0.96
TDP1-210ENST00000554976 CPNE1Q99829 537 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 NT5MQ9NPB1 228 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 KCNK9Q9NPC2 374 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 DENND4AQ7Z401 1863 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 DOCK6Q96HP0 2047 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 TTC24A2A3L6 582 aaPredicted RBP9.02□□□□□ -0.97
TDP1-210ENST00000554976 NDUFAB1O14561 156 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 CXCL14O95715 111 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 POU2F2P09086 479 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 ADRA1DP25100 572 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 GABRB3P28472 473 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 CRHR1P34998 444 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 RGRP47804 291 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 WNT3AP56704 352 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 MAXP61244 160 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 CYP4F8P98187 520 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 UBE3AQ05086 875 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 FSCBQ5H9T9 825 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 PRSS36Q5K4E3 855 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 RASSF3Q86WH2 238 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 OR7D4Q8NG98 312 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 ZNF669Q96BR6 464 aaPredicted RBP9.02□□□□□ -0.97
TDP1-210ENST00000554976 TCF25Q9BQ70 676 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 SP110Q9HB58 689 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 BFARQ9NZS9 450 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 GGT7Q9UJ14 662 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 PLLPQ9Y342 182 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 CHD9Q3L8U1 2897 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.02□□□□□ -0.97
TDP1-210ENST00000554976 TCP11X1B4DZS4 312 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 GOLGA8RI6L899 631 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 KRT37O76014 449 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 C8AP07357 584 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 ITGA2BP08514 1039 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 CD86P42081 329 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 LIMK2P53671 638 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 RFTN1Q14699 578 aaPredicted RBP9.02□□□□□ -0.97
TDP1-210ENST00000554976 PABPC1LQ4VXU2 614 aaKnown RBP9.02□□□□□ -0.97
TDP1-210ENST00000554976 GRTP1Q5TC63 336 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 LVRNQ6Q4G3 990 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 MFSD6LQ8IWD5 586 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 ARL14EPQ8N8R7 260 aaPredicted RBP9.02□□□□□ -0.97
TDP1-210ENST00000554976 ACVR1CQ8NER5 493 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 IPMKQ8NFU5 416 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 OR13J1Q8NGT2 312 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 ACMSDQ8TDX5 336 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 SPOCK2Q92563 424 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 PTPRN2Q92932 1015 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 ITFG2Q969R8 447 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 ALG13Q9NP73 1137 aaKnown RBP9.02□□□□□ -0.97
TDP1-210ENST00000554976 SLC2A6Q9UGQ3 507 aa9.02□□□□□ -0.97
TDP1-210ENST00000554976 SNX3O60493 162 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 PAPSS2O95340 614 aaPredicted RBP9.01□□□□□ -0.97
TDP1-210ENST00000554976 MT-ND3P03897 115 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 SIRPB2Q5JXA9 342 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 CCDC149Q6ZUS6 474 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 YTHDF3Q7Z739 585 aaKnown RBP9.01□□□□□ -0.97
TDP1-210ENST00000554976 GALNT7Q86SF2 657 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 KCNMB4Q86W47 210 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 KREMEN2Q8NCW0 462 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 PSKH2Q96QS6 385 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 TGS1Q96RS0 853 aaKnown RBP9.01□□□□□ -0.97
TDP1-210ENST00000554976 SRPK1Q96SB4 655 aaKnown RBP9.01□□□□□ -0.97
TDP1-210ENST00000554976 C17orf80Q9BSJ5 609 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 VPS11Q9H270 941 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.01□□□□□ -0.97
TDP1-210ENST00000554976 LHX3Q9UBR4 397 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 CPQQ9Y646 472 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 ZBBXA8MT70 800 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 TPP1O14773 563 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 KLF11O14901 512 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 KRT38O76015 456 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 WISP3O95389 354 aaPredicted RBP9.01□□□□□ -0.97
TDP1-210ENST00000554976 TOP3BO95985 862 aaKnown RBP9.01□□□□□ -0.97
TDP1-210ENST00000554976 ADH1AP07327 375 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 F7P08709 466 aaPredicted RBP9.01□□□□□ -0.97
TDP1-210ENST00000554976 IRF1P10914 325 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 MBL2P11226 248 aaPredicted RBP9.01□□□□□ -0.97
TDP1-210ENST00000554976 CA4P22748 312 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 HOXA9P31269 272 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 IRS1P35568 1242 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 GP5P40197 560 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 PDE1CQ14123 709 aaPredicted RBP9.01□□□□□ -0.97
TDP1-210ENST00000554976 ITIH4Q14624 930 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 KIAA0930Q6ICG6 404 aaPredicted RBP9.01□□□□□ -0.97
TDP1-210ENST00000554976 C7orf61Q8IZ16 206 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 OR6Y1Q8NGX8 325 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 SHKBP1Q8TBC3 707 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 FEM1CQ96JP0 617 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 SLC46A2Q9BY10 475 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 NKIRAS1Q9NYS0 192 aa9.01□□□□□ -0.97
TDP1-210ENST00000554976 CXorf51AA0A1B0GTR3 108 aa9□□□□□ -0.97
TDP1-210ENST00000554976 LDB2O43679 373 aa9□□□□□ -0.97
TDP1-210ENST00000554976 ATP9BO43861 1147 aa9□□□□□ -0.97
TDP1-210ENST00000554976 LPXNO60711 386 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms