RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ACAD11Q709F0 780 aa15.89■□□□□ 0.13
ARHGEF40-203ENST00000554514 ARHGAP12Q8IWW6 846 aa15.89■□□□□ 0.13
ARHGEF40-203ENST00000554514 SPDYE1Q8NFV5 336 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF40-203ENST00000554514 CASP10Q92851 521 aa15.89■□□□□ 0.13
ARHGEF40-203ENST00000554514 GRID2O43424 1007 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 GLDCP23378 1020 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 MAXP61244 160 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 CSHL1Q14406 222 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 IL31Q6EBC2 164 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 TFAP2DQ7Z6R9 452 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 RTKNQ9BST9 563 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 RRN3Q9NYV6 651 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 CDYLQ9Y232 598 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 SLC12A2P55011 1212 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 POLE2P56282 527 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 TAS2R39P59534 338 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 RAB10P61026 200 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 TAF2Q6P1X5 1199 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 DSELQ8IZU8 1212 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 SNX31Q8N9S9 440 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 TMA16Q96EY4 203 aaKnown RBP15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 GBP5Q96PP8 586 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 MCMBPQ9BTE3 642 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 KLHL4Q9C0H6 718 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 MID2Q9UJV3 735 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 MAFKO60675 156 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 ARNTP27540 789 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 CYLC2Q14093 348 aaPredicted RBP15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 TAF1CQ15572 869 aaPredicted RBP15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 ZNF789Q5FWF6 425 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 SH2D4BQ5SQS7 431 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 RBM20Q5T481 1227 aaKnown RBP15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 C14orf80Q86SX3 495 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 C2orf69Q8N8R5 385 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 ANKRD6Q9Y2G4 727 aa15.88■□□□□ 0.13
ARHGEF40-203ENST00000554514 IQCA1LA6NCM1 817 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 MGEA5O60502 916 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 H2AFYO75367 372 aaKnown RBP15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 CABYRO75952 493 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 THRAP10827 490 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 THPOP40225 353 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 SLC5A3P53794 718 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 MTTPP55157 894 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 MRPS22P82650 360 aaKnown RBP15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 PRKAA1Q13131 559 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 DENND5AQ6IQ26 1287 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 CNSTQ6PJW8 725 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 LDB1Q86U70 411 aaPredicted RBP15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 PDSS2Q86YH6 399 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 LSMEM2Q8N112 164 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 FAM156AQ8NDB6 213 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 STYXQ8WUJ0 223 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 NPAS2Q99743 824 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 POMKQ9H5K3 350 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 DNAJB4Q9UDY4 337 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 IRAK2O43187 625 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 ANXA9O76027 345 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 MT-CO1P00395 513 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 APOA4P06727 396 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 CCNCP24863 283 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 THOP1P52888 689 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 GRIK3Q13003 919 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 MSLNQ13421 630 aaPredicted RBP15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 OVOS1Q6IE37 1185 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 KYQ8NBH2 561 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 HEXDCQ8WVB3 486 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 PPP2R3CQ969Q6 453 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 GCNAQ96QF7 691 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 CSNK1G1Q9HCP0 422 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 NEU3Q9UQ49 428 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 TLL2Q9Y6L7 1015 aa15.87■□□□□ 0.13
ARHGEF40-203ENST00000554514 RGSL1A5PLK6 1076 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 XRCC1P18887 633 aaPredicted RBP15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 PAPOLAP51003 745 aaKnown RBP15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 BTKQ06187 659 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 JADE3Q92613 823 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 DPF3Q92784 378 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 KLHL5Q96PQ7 755 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 NSMCE4AQ9NXX6 385 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 TCAF1Q9Y4C2 921 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 CAPN8A6NHC0 703 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 CCR1P32246 355 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 PPARGP37231 505 aaPredicted RBP15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 ART3Q13508 389 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 TSTD2Q5T7W7 516 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 SPATA2LQ8IUW3 424 aaPredicted RBP15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 TXNDC5Q8NBS9 432 aaKnown RBP15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 RNF217Q8TC41 542 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 PHF21BQ96EK2 531 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 FCRL5Q96RD9 977 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 ARHGEF38Q9NXL2 777 aa15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 ABI2Q9NYB9 513 aaPredicted RBP15.86■□□□□ 0.13
ARHGEF40-203ENST00000554514 MATN3O15232 486 aa15.85■□□□□ 0.13
ARHGEF40-203ENST00000554514 TSPAN8P19075 237 aa15.85■□□□□ 0.13
ARHGEF40-203ENST00000554514 ARCN1P48444 511 aaKnown RBP15.85■□□□□ 0.13
ARHGEF40-203ENST00000554514 CD151P48509 253 aa15.85■□□□□ 0.13
ARHGEF40-203ENST00000554514 FLOT2Q14254 428 aa15.85■□□□□ 0.13
ARHGEF40-203ENST00000554514 FRG1Q14331 258 aaKnown RBP15.85■□□□□ 0.13
ARHGEF40-203ENST00000554514 UGP2Q16851 508 aa15.85■□□□□ 0.13
ARHGEF40-203ENST00000554514 MMEL1Q495T6 779 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms