RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 HDAC4P56524 1084 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 GSCP56915 257 aaPredicted RBP19.08■□□□□ 0.64
CPSF2-203ENST00000554290 HNRNPKP61978 463 aaKnown RBP eCLIP19.08■□□□□ 0.64
CPSF2-203ENST00000554290 SNRPD1P62314 119 aaKnown RBP19.08■□□□□ 0.64
CPSF2-203ENST00000554290 PTP4A2Q12974 167 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 RTP5Q14D33 572 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 ZNF805Q5CZA5 627 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 FAM72AQ5TYM5 149 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 FAM72DQ6L9T8 149 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 FAM72BQ86X60 149 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 OR2AP1Q8NGE2 309 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 NTAN1Q96AB6 310 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 ARHGEF26Q96DR7 871 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 DCBLD2Q96PD2 775 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 PCDHB18PQ96TA0 734 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 OSBPL1AQ9BXW6 950 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 EVA1BQ9NVM1 165 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 DNAJC28Q9NX36 388 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 NLGN3Q9NZ94 848 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 IPO11Q9UI26 975 aaKnown RBP19.08■□□□□ 0.64
CPSF2-203ENST00000554290 CLCA2Q9UQC9 943 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 C16orf96A6NNT2 1141 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 FPGTO14772 594 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 GJB6O95452 261 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 GSRP00390 522 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 GPD1P21695 349 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 INSM1Q01101 510 aaPredicted RBP19.07■□□□□ 0.64
CPSF2-203ENST00000554290 SEMG2Q02383 582 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 COL9A2Q14055 689 aaPredicted RBP19.07■□□□□ 0.64
CPSF2-203ENST00000554290 CLEC16AQ2KHT3 1053 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 MYLK3Q32MK0 819 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 SASS6Q6UVJ0 657 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 KYAT3Q6YP21 454 aaKnown RBP19.07■□□□□ 0.64
CPSF2-203ENST00000554290 SLFN11Q7Z7L1 901 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 ZNF354CQ86Y25 554 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 PHF13Q86YI8 300 aaPredicted RBP19.07■□□□□ 0.64
CPSF2-203ENST00000554290 SLC22A18ASQ8N1D0 253 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 CCDC185Q8N715 623 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 C3orf20Q8ND61 904 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 OR6K2Q8NGY2 324 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 BMFQ96LC9 184 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 LENG8Q96PV6 779 aaPredicted RBP19.07■□□□□ 0.64
CPSF2-203ENST00000554290 C1QTNF2Q9BXJ5 285 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 LIMA1Q9UHB6 759 aaKnown RBP19.07■□□□□ 0.64
CPSF2-203ENST00000554290 APC2O95996 2303 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 ACACAQ13085 2346 aa19.07■□□□□ 0.64
CPSF2-203ENST00000554290 DOCK4Q8N1I0 1966 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 SPTY2D1-AS1A0A0U1RR47 76 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 POM121BA6NF01 834 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 SIGLEC16A6NMB1 481 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 H3BM21 787 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 SCAMP1O15126 338 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 KDELR3O43731 214 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 CKMT1AP12532 417 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 ABCG1P45844 678 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 RABIFP47224 123 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 DUSP3P51452 185 aaPredicted RBP19.06■□□□□ 0.64
CPSF2-203ENST00000554290 RAD51Q06609 339 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 FGL2Q14314 439 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 EFHC2Q5JST6 749 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 WDR59Q6PJI9 974 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 RBM43Q6ZSC3 357 aaKnown RBP19.06■□□□□ 0.64
CPSF2-203ENST00000554290 TMC6Q7Z403 805 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 DCBLD1Q8N8Z6 715 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 ASB12Q8WXK4 309 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 DUSP23Q9BVJ7 150 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 MAGEB5Q9BZ81 275 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 GPR27Q9NS67 375 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 SEPT11Q9NVA2 429 aaKnown RBP19.06■□□□□ 0.64
CPSF2-203ENST00000554290 ANO10Q9NW15 660 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 NEU3Q9UQ49 428 aa19.06■□□□□ 0.64
CPSF2-203ENST00000554290 IGLON5A6NGN9 336 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 LGALS16A8MUM7 142 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 RRP8O43159 456 aaKnown RBP19.05■□□□□ 0.64
CPSF2-203ENST00000554290 BUB1O43683 1085 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 CSF2P04141 144 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 UGT2B4P06133 528 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 GIMD1P0DJR0 217 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 DESP17661 470 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 CDK11BP21127 795 aaKnown RBP19.05■□□□□ 0.64
CPSF2-203ENST00000554290 EPHB2P29323 1055 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 GKP32189 559 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 MYL5Q02045 173 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 UBXN1Q04323 297 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 C1QBPQ07021 282 aaKnown RBP19.05■□□□□ 0.64
CPSF2-203ENST00000554290 FZD2Q14332 565 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 ZNF542PQ5EBM4 170 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 SCYL2Q6P3W7 929 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 LEKR1Q6ZMV7 388 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 LRRC69Q6ZNQ3 347 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 PARGQ86W56 976 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 CASKIN2Q8WXE0 1202 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 GDAP1L1Q96MZ0 367 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 USP29Q9HBJ7 922 aa19.05■□□□□ 0.64
CPSF2-203ENST00000554290 URB1O60287 2271 aaKnown RBP19.04■□□□□ 0.64
CPSF2-203ENST00000554290 DOCK9Q9BZ29 2069 aa19.04■□□□□ 0.64
CPSF2-203ENST00000554290 RAD51BO15315 384 aa19.04■□□□□ 0.64
CPSF2-203ENST00000554290 MT-CO3P00414 261 aa19.04■□□□□ 0.64
CPSF2-203ENST00000554290 CCDC172P0C7W6 258 aa19.04■□□□□ 0.64
CPSF2-203ENST00000554290 NME1P15531 152 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms