RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 PCDH20Q8N6Y1 951 aaKnown RBP7.76□□□□□ -1.17
TDP1-209ENST00000554180 TERB1Q8NA31 727 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 KDM1BQ8NB78 822 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 TSEN2Q8NCE0 465 aaKnown RBP7.76□□□□□ -1.17
TDP1-209ENST00000554180 DNASE1L2Q92874 299 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 ZFYVE19Q96K21 471 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 NUDCD1Q96RS6 583 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 SEMA3CQ99985 751 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 NAT9Q9BTE0 207 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 FSD1LQ9BXM9 530 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 PLA2G2FQ9BZM2 168 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 PABPC3Q9H361 631 aaKnown RBP7.76□□□□□ -1.17
TDP1-209ENST00000554180 BRD9Q9H8M2 597 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 ARNT2Q9HBZ2 717 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 CASS4Q9NQ75 786 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 LHX3Q9UBR4 397 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 ARIH1Q9Y4X5 557 aaPredicted RBP7.76□□□□□ -1.17
TDP1-209ENST00000554180 REV3LO60673 3130 aa7.76□□□□□ -1.17
TDP1-209ENST00000554180 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.75□□□□□ -1.17
TDP1-209ENST00000554180 OTOL1A6NHN0 477 aaPredicted RBP7.75□□□□□ -1.17
TDP1-209ENST00000554180 INSIG1O15503 277 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 ATP9BO43861 1147 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 TTC4O95801 387 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 IGSF6O95976 241 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 MT-CYBP00156 380 aaPredicted RBP7.75□□□□□ -1.17
TDP1-209ENST00000554180 GSRP00390 522 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 FGF1P05230 155 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 MMP2P08253 660 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 ABHD2P08910 425 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 GSTA2P09210 222 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 DLDP09622 509 aaKnown RBP7.75□□□□□ -1.17
TDP1-209ENST00000554180 NUDT17P0C025 328 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 SRCP12931 536 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 HLA-DPA1P20036 260 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 GJA4P35212 333 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 NNMTP40261 264 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 OPRD1P41143 372 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 CD86P42081 329 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 MAGEA4P43358 317 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 PMS2P54278 862 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 WNT3AP56704 352 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 MAXP61244 160 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 SNRPD1P62314 119 aaKnown RBP7.75□□□□□ -1.17
TDP1-209ENST00000554180 SKOR1P84550 965 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 DSC2Q02487 901 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 ITKQ08881 620 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 NIPAL4Q0D2K0 466 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 PDIA2Q13087 525 aaKnown RBP7.75□□□□□ -1.17
TDP1-209ENST00000554180 GRM3Q14832 879 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 CYTH1Q15438 398 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 CCDC85BQ15834 202 aaPredicted RBP7.75□□□□□ -1.17
TDP1-209ENST00000554180 GEN1Q17RS7 908 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 CFAP58Q5T655 872 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 C22orf39Q6P5X5 142 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 KDELC1Q6UW63 502 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 LINGO4Q6UY18 593 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 LEKR1Q6ZMV7 388 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 C12orf40Q86WS4 652 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 ZBED8Q8IZ13 594 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 PHTF2Q8N3S3 785 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 SH2D3CQ8N5H7 860 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 NAT16Q8N8M0 369 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 ATP11CQ8NB49 1132 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 IPMKQ8NFU5 416 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 SPATA22Q8NHS9 363 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 PTCD2Q8WV60 388 aaKnown RBP7.75□□□□□ -1.17
TDP1-209ENST00000554180 UCMAQ8WVF2 138 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 SPOCK2Q92563 424 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 MSANTD3Q96H12 275 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 FEM1CQ96JP0 617 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 MRGPRX2Q96LB1 330 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 GDAP1L1Q96MZ0 367 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 TBL1YQ9BQ87 522 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 FUT8Q9BYC5 575 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 IL22Q9GZX6 179 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 CDC42EP4Q9H3Q1 356 aaKnown RBP7.75□□□□□ -1.17
TDP1-209ENST00000554180 SAYSD1Q9NPB0 183 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 SCUBE2Q9NQ36 999 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 ELOVL2Q9NXB9 296 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 GTSE1Q9NYZ3 720 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 BFARQ9NZS9 450 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 SLC8A2Q9UPR5 921 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 FCF1Q9Y324 198 aaKnown RBP7.75□□□□□ -1.17
TDP1-209ENST00000554180 TEX264Q9Y6I9 313 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 COL4A3Q01955 1670 aa7.75□□□□□ -1.17
TDP1-209ENST00000554180 MYO18AQ92614 2054 aaKnown RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 SHROOM3Q8TF72 1996 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 LOC285095A0A1B0GVY8 99 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 MAGEB16A2A368 324 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 SDR42E2A6NKP2 422 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 F5H423 210 aaPredicted RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 MAP2K7O14733 419 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 NPC1O15118 1278 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 RIPK2O43353 540 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 SMAD6O43541 496 aaKnown RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 SOCS5O75159 536 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 PMPCBO75439 489 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 ZNF821O75541 412 aaPredicted RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 NDST3O95803 873 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 MT-CO1P00395 513 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms