RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 GGA2Q9UJY4 613 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 FZD4Q9ULV1 537 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 PCDHA5Q9Y5H7 936 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 ENTPD2Q9Y5L3 495 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 TBC1D3DA0A087WVF3 549 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TBC1D3IA0A087WXS9 549 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TBC1D3EA0A087X179 549 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TBC1D3KA0A087X1G2 549 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 LY6G6EA0A0G2JKS1 128 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 PRAMEF27A3QJZ7 478 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 BLACEA4D250 179 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TBC1D3FA6NER0 549 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TBC1D3LB9A6J9 549 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TNFSF15O95150 251 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TBC1D3HP0C7X1 549 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 FAM200BP0CF97 657 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 THEGLP0DJG4 465 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 POLR2EP19388 210 aaKnown RBP7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TGM2P21980 687 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 NUDT1P36639 197 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 ADPRHP54922 357 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 PPP2CBP62714 309 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 PPP2CAP67775 309 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 EFEMP1Q12805 493 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 IGFBP7Q16270 282 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 HNRNPA1L2Q32P51 320 aaKnown RBP7.1□□□□□ -1.27
ATXN3-224ENST00000554040 C9orf64Q5T6V5 341 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TBC1D3GQ6DHY5 549 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TBC1D3CQ6IPX1 549 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 CLEC20AQ6ZU45 233 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 SND1Q7KZF4 910 aaKnown RBP eCLIP7.1□□□□□ -1.27
ATXN3-224ENST00000554040 CCDC186Q7Z3E2 898 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 MMAAQ8IVH4 418 aaKnown RBP7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TBC1D3Q8IZP1 549 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-224ENST00000554040 C12orf29Q8N999 325 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 RASSF8Q8NHQ8 419 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 IFI44Q8TCB0 444 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TTC17Q96AE7 1141 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 TMA16Q96EY4 203 aaKnown RBP7.1□□□□□ -1.27
ATXN3-224ENST00000554040 APOLD1Q96LR9 279 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 CGRRF1Q99675 332 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 WNT10AQ9GZT5 417 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 ATP13A1Q9HD20 1204 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 PNPLA8Q9NP80 782 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 OLFML3Q9NRN5 406 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 GEMIN8Q9NWZ8 242 aaKnown RBP7.1□□□□□ -1.27
ATXN3-224ENST00000554040 FAM8A1Q9UBU6 413 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 LIMCH1Q9UPQ0 1083 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 DMTF1Q9Y222 760 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 KIF3AQ9Y496 699 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 U3KQA8 63 aa7.1□□□□□ -1.27
ATXN3-224ENST00000554040 MYH10P35580 1976 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 SLC12A8A0AV02 714 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 TARSL2A2RTX5 802 aaKnown RBP7.09□□□□□ -1.27
ATXN3-224ENST00000554040 PMS2P1A4D2B8 440 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 NEMP2A6NFY4 417 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 SCAMP1O15126 338 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 FFAR2O15552 330 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 NOBOXO60393 691 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 PIAS2O75928 621 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 KRT38O76015 456 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 ALPPL2P10696 532 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 ADORA2BP29275 332 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 CD70P32970 193 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 LONP1P36776 959 aaKnown RBP7.09□□□□□ -1.27
ATXN3-224ENST00000554040 AFMP43652 599 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 ZNF445P59923 1031 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 ST8SIA6P61647 398 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 PSMD6Q15008 389 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 TBR1Q16650 682 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 RBM44Q6ZP01 1051 aaKnown RBP7.09□□□□□ -1.27
ATXN3-224ENST00000554040 SV2BQ7L1I2 683 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 UNC93AQ86WB7 457 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 AADATQ8N5Z0 425 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 KDM1BQ8NB78 822 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 WDR36Q8NI36 951 aaKnown RBP7.09□□□□□ -1.27
ATXN3-224ENST00000554040 JAKMIP2Q96AA8 810 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 CCDC127Q96BQ5 260 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 LIN37Q96GY3 246 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-224ENST00000554040 LMLNQ96KR4 655 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 FGFBP2Q9BYJ0 223 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 SDCBP2Q9H190 292 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 EPN3Q9H201 632 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 CARS2Q9HA77 564 aaKnown RBP7.09□□□□□ -1.27
ATXN3-224ENST00000554040 FAM49BQ9NUQ9 324 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 NLGN3Q9NZ94 848 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 MARCH2Q9P0N8 246 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 CYTH4Q9UIA0 394 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 STOML2Q9UJZ1 356 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 STRIP2Q9ULQ0 834 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 ST14Q9Y5Y6 855 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 CAPN6Q9Y6Q1 641 aa7.09□□□□□ -1.27
ATXN3-224ENST00000554040 CENPEQ02224 2701 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 FRMD3A2A2Y4 597 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 PRAMEF26H0Y7S4 382 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 K7ESM1 405 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 TCEA3O75764 348 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 CENPBP07199 599 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-224ENST00000554040 ITGA2BP08514 1039 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 IDEP14735 1019 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms