RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 UBLCP1Q8WVY7 318 aaPredicted RBP11.04□□□□□ -0.64
PABPN1-203ENST00000553960 ATP2A3Q93084 1043 aa11.04□□□□□ -0.64
PABPN1-203ENST00000553960 LRIG1Q96JA1 1093 aa11.04□□□□□ -0.64
PABPN1-203ENST00000553960 ATP6V1G3Q96LB4 118 aa11.04□□□□□ -0.64
PABPN1-203ENST00000553960 TUBGCP5Q96RT8 1024 aa11.04□□□□□ -0.64
PABPN1-203ENST00000553960 RUFY1Q96T51 708 aa11.04□□□□□ -0.64
PABPN1-203ENST00000553960 CPEB1Q9BZB8 566 aaKnown RBP11.04□□□□□ -0.64
PABPN1-203ENST00000553960 SSU72Q9NP77 194 aaKnown RBP11.04□□□□□ -0.64
PABPN1-203ENST00000553960 VPS18Q9P253 973 aa11.04□□□□□ -0.64
PABPN1-203ENST00000553960 VPS51Q9UID3 782 aa11.04□□□□□ -0.64
PABPN1-203ENST00000553960 RABGEF1Q9UJ41 708 aa11.04□□□□□ -0.64
PABPN1-203ENST00000553960 INTS6Q9UL03 887 aaKnown RBP11.04□□□□□ -0.64
PABPN1-203ENST00000553960 SOX13Q9UN79 622 aa11.04□□□□□ -0.64
PABPN1-203ENST00000553960 PPIL1Q9Y3C6 166 aa11.04□□□□□ -0.64
PABPN1-203ENST00000553960 FAM169AQ9Y6X4 670 aa11.04□□□□□ -0.64
PABPN1-203ENST00000553960 KIAA1549LQ6ZVL6 1849 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 TCRBV9S1A1TA0A576 114 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 MROH6A6NGR9 719 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 GOLGA6L10A6NI86 522 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 ANHXE9PGG2 379 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 RASGRF2O14827 1237 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 NPC1O15118 1278 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 INSIG1O15503 277 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 HTRA2O43464 458 aaPredicted RBP11.03□□□□□ -0.64
PABPN1-203ENST00000553960 FZD6O60353 706 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 GSRP00390 522 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 POLBP06746 335 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 SRPRAP08240 638 aaKnown RBP11.03□□□□□ -0.64
PABPN1-203ENST00000553960 CISD3P0C7P0 127 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 IRF1P10914 325 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 LAMP2P13473 410 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 CA4P22748 312 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 CNTFP26441 200 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 ATP5DP30049 168 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 HLA-FP30511 346 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 ELK3P41970 407 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 WNT3AP56704 352 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 NIPAL4Q0D2K0 466 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 LMAN2Q12907 356 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 ZNF235Q14590 738 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 FASTKD3Q14CZ7 662 aaKnown RBP11.03□□□□□ -0.64
PABPN1-203ENST00000553960 DHCR24Q15392 516 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 GAB4Q2WGN9 574 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 IL31Q6EBC2 164 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 MTSS1LQ765P7 747 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 CIR1Q86X95 450 aaPredicted RBP11.03□□□□□ -0.64
PABPN1-203ENST00000553960 TMEM25Q86YD3 366 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 IGDCC3Q8IVU1 814 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 CNTN4Q8IWV2 1026 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 SUGP1Q8IWZ8 645 aaKnown RBP11.03□□□□□ -0.64
PABPN1-203ENST00000553960 AHI1Q8N157 1196 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 PCDH20Q8N6Y1 951 aaKnown RBP11.03□□□□□ -0.64
PABPN1-203ENST00000553960 FBXO36Q8NEA4 188 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 DDI1Q8WTU0 396 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 STAMBPL1Q96FJ0 436 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 LRRC3BQ96PB8 259 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 TBL1YQ9BQ87 522 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 MCMBPQ9BTE3 642 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 ZFP14Q9HCL3 533 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 SEPT10Q9P0V9 454 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 LHX3Q9UBR4 397 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 ZC3H7BQ9UGR2 993 aaKnown RBP11.03□□□□□ -0.64
PABPN1-203ENST00000553960 VPS28Q9UK41 221 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 MYOFQ9NZM1 2061 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 MIA3Q5JRA6 1907 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 TRIOBPQ9H2D6 2365 aa11.03□□□□□ -0.64
PABPN1-203ENST00000553960 SRRM3A6NNA2 597 aaPredicted RBP11.02□□□□□ -0.65
PABPN1-203ENST00000553960 MUSKO15146 869 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 ZNF821O75541 412 aaPredicted RBP11.02□□□□□ -0.65
PABPN1-203ENST00000553960 TMCC1O94876 653 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 NDST3O95803 873 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 CYP17A1P05093 508 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 ATXN1LP0C7T5 689 aaKnown RBP11.02□□□□□ -0.65
PABPN1-203ENST00000553960 PABPC1P11940 636 aaKnown RBP11.02□□□□□ -0.65
PABPN1-203ENST00000553960 TYRP14679 529 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 ADRA1DP25100 572 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 MZF1P28698 734 aaPredicted RBP11.02□□□□□ -0.65
PABPN1-203ENST00000553960 CSKP41240 450 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 POLD2P49005 469 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 CDK18Q07002 472 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 IHHQ14623 411 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 SLC1A5Q15758 541 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 BBS9Q3SYG4 887 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 LY6G5CQ5SRR4 150 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 RARS2Q5T160 578 aaKnown RBP11.02□□□□□ -0.65
PABPN1-203ENST00000553960 PKN3Q6P5Z2 889 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 NCEH1Q6PIU2 408 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 UNC5AQ6ZN44 842 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 B4GALNT4Q76KP1 1039 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 OTOP3Q7RTS5 596 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 ADIPOR2Q86V24 386 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 CCDC25Q86WR0 208 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 LRRC6Q86X45 466 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 PALM2Q8IXS6 379 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 WFDC5Q8TCV5 224 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 DTX3LQ8TDB6 740 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 SLC44A1Q8WWI5 657 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 VOPP1Q96AW1 172 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 RSPRY1Q96DX4 576 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 C9orf72Q96LT7 481 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms