RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 TBC1D3FA6NER0 549 aaPredicted RBP23.62■■□□□ 1.37
NEK9-203ENST00000553945 TBC1D3LB9A6J9 549 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 GDF9O60383 454 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 TBC1D3HP0C7X1 549 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 IRX4P78413 519 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 LRRC38Q5VT99 294 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 TBC1D3GQ6DHY5 549 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 TBC1D3CQ6IPX1 549 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 RABEPKQ7Z6M1 372 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 TBC1D3Q8IZP1 549 aaPredicted RBP23.62■■□□□ 1.37
NEK9-203ENST00000553945 ZCCHC9Q8N567 271 aaKnown RBP23.62■■□□□ 1.37
NEK9-203ENST00000553945 ATPAF2Q8N5M1 289 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 FAM131CQ96AQ9 280 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 NUSAP1Q9BXS6 441 aaKnown RBP23.62■■□□□ 1.37
NEK9-203ENST00000553945 RXFP3Q9NSD7 469 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 SUSD2Q9UGT4 822 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 SALL4Q9UJQ4 1053 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 ALG6Q9Y672 507 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 PRR5-ARHGAP8B1AHC4 643 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 PLRG1O43660 514 aaKnown RBP23.61■■□□□ 1.37
NEK9-203ENST00000553945 KRT1P04264 644 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 IGHV4-34P06331 123 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 VAV2P52735 878 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 NAP1L1P55209 391 aaKnown RBP23.61■■□□□ 1.37
NEK9-203ENST00000553945 ARHGAP8P85298 464 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 RAD51Q06609 339 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 CCDC15Q0P6D6 951 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 PAFAH1B3Q15102 231 aaKnown RBP23.61■■□□□ 1.37
NEK9-203ENST00000553945 PIP5KL1Q5T9C9 394 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 NCBP2-AS2Q69YL0 99 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 SLC23A3Q6PIS1 610 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 ERN2Q76MJ5 926 aaKnown RBP23.61■■□□□ 1.37
NEK9-203ENST00000553945 FAF2Q96CS3 445 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 LRIG1Q96JA1 1093 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 DESI2Q9BSY9 194 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 CINPQ9BW66 212 aaPredicted RBP23.61■■□□□ 1.37
NEK9-203ENST00000553945 HDAC8Q9BY41 377 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 KDM4CQ9H3R0 1056 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 DDX56Q9NY93 547 aaKnown RBP23.61■■□□□ 1.37
NEK9-203ENST00000553945 SLC6A14Q9UN76 642 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 DUSP10Q9Y6W6 482 aa23.61■■□□□ 1.37
NEK9-203ENST00000553945 LNP1A1A4G5 178 aa23.6■■□□□ 1.37
NEK9-203ENST00000553945 MFSD11O43934 449 aa23.6■■□□□ 1.37
NEK9-203ENST00000553945 UGT2B4P06133 528 aa23.6■■□□□ 1.37
NEK9-203ENST00000553945 ITGB7P26010 798 aa23.6■■□□□ 1.37
NEK9-203ENST00000553945 RFTN1Q14699 578 aaPredicted RBP23.6■■□□□ 1.37
NEK9-203ENST00000553945 DAAM2Q86T65 1068 aa23.6■■□□□ 1.37
NEK9-203ENST00000553945 TPCN2Q8NHX9 752 aa23.6■■□□□ 1.37
NEK9-203ENST00000553945 EDEM2Q9BV94 578 aa23.6■■□□□ 1.37
NEK9-203ENST00000553945 OSBPL1AQ9BXW6 950 aa23.6■■□□□ 1.37
NEK9-203ENST00000553945 LACRTQ9GZZ8 138 aa23.6■■□□□ 1.37
NEK9-203ENST00000553945 FSCN3Q9NQT6 498 aa23.6■■□□□ 1.37
NEK9-203ENST00000553945 A0A1B0GTW7 788 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 BCAT2O15382 392 aaPredicted RBP23.59■■□□□ 1.37
NEK9-203ENST00000553945 INSIG1O15503 277 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 SERPINF2P08697 491 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 CD27P26842 260 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 CCR5P51681 352 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 TAS2R38P59533 333 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 LBRQ14739 615 aaKnown RBP23.59■■□□□ 1.37
NEK9-203ENST00000553945 ZNF805Q5CZA5 627 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 TMCO4Q5TGY1 634 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 C11orf63Q6NUN7 778 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 FBXL19Q6PCT2 694 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 GDPD4Q6W3E5 623 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 PQLC3Q8N755 202 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 TSEN2Q8NCE0 465 aaKnown RBP23.59■■□□□ 1.37
NEK9-203ENST00000553945 RNF25Q96BH1 459 aaPredicted RBP23.59■■□□□ 1.37
NEK9-203ENST00000553945 KLHL32Q96NJ5 620 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 ZNF599Q96NL3 588 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 RNF157Q96PX1 679 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 GRPEL1Q9HAV7 217 aa23.59■■□□□ 1.37
NEK9-203ENST00000553945 C3orf70A6NLC5 250 aaPredicted RBP23.58■■□□□ 1.37
NEK9-203ENST00000553945 BTNL10A8MVZ5 291 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 PJA2O43164 708 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 MAFKO60675 156 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 MAP3K6O95382 1288 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 NEK3P51956 506 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 PPP2CBP62714 309 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 PPP2CAP67775 309 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 SLC10A7Q0GE19 358 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 RSPO4Q2I0M5 234 aaPredicted RBP23.58■■□□□ 1.37
NEK9-203ENST00000553945 PARS2Q7L3T8 475 aaKnown RBP23.58■■□□□ 1.37
NEK9-203ENST00000553945 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.58■■□□□ 1.37
NEK9-203ENST00000553945 NSMCE1Q8WV22 266 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 CALR3Q96L12 384 aaKnown RBP23.58■■□□□ 1.37
NEK9-203ENST00000553945 MAK16Q9BXY0 300 aaKnown RBP23.58■■□□□ 1.37
NEK9-203ENST00000553945 CAPN10Q9HC96 672 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 PREBQ9HCU5 417 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 SEPT3Q9UH03 358 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 CDV3Q9UKY7 258 aaKnown RBP23.58■■□□□ 1.37
NEK9-203ENST00000553945 SLCO1B1Q9Y6L6 691 aa23.58■■□□□ 1.37
NEK9-203ENST00000553945 GON4LQ3T8J9 2241 aa23.57■■□□□ 1.36
NEK9-203ENST00000553945 ZNF487B1APH4 448 aa23.57■■□□□ 1.36
NEK9-203ENST00000553945 PSTPIP1O43586 416 aa23.57■■□□□ 1.36
NEK9-203ENST00000553945 ADRB3P13945 408 aa23.57■■□□□ 1.36
NEK9-203ENST00000553945 ENGP17813 658 aa23.57■■□□□ 1.36
NEK9-203ENST00000553945 RGRP47804 291 aa23.57■■□□□ 1.36
NEK9-203ENST00000553945 GBE1Q04446 702 aa23.57■■□□□ 1.36
NEK9-203ENST00000553945 GALNT2Q10471 571 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms