RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 FNDC3BQ53EP0 1204 aaKnown RBP16.37■□□□□ 0.21
ACTN1-209ENST00000553659 BOLA3Q53S33 107 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 ADGRF1Q5T601 910 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 BSPRYQ5W0U4 402 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 OLFML1Q6UWY5 402 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 FAM183BPQ6ZVS7 135 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 CHST9Q7L1S5 443 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 TMC3Q7Z5M5 1100 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 KIAA0907Q7Z7F0 614 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-209ENST00000553659 MAP7D3Q8IWC1 876 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 TSEN2Q8NCE0 465 aaKnown RBP16.37■□□□□ 0.21
ACTN1-209ENST00000553659 RHBDD1Q8TEB9 315 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 RNF139Q8WU17 664 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 TEKT4Q8WW24 435 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 RNF25Q96BH1 459 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-209ENST00000553659 SNF8Q96H20 258 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 CDC6Q99741 560 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 C6orf106Q9H6K1 298 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-209ENST00000553659 ZDHHC18Q9NUE0 388 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 PSD3Q9NYI0 1048 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 FAM153AQ9UHL3 310 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 GPSM3Q9Y4H4 160 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 BAHCC1Q9P281 2608 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 ATRXP46100 2492 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 GOLGA4Q13439 2230 aaKnown RBP16.36■□□□□ 0.21
ACTN1-209ENST00000553659 ZNF487B1APH4 448 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 AGPSO00116 658 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 POLR3GO15318 223 aaPredicted RBP16.36■□□□□ 0.21
ACTN1-209ENST00000553659 LATS1O95835 1130 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 PDGFRAP16234 1089 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 ACSL1P33121 698 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 CDKN2BP42772 138 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 SUZ12Q15022 739 aaKnown RBP16.36■□□□□ 0.21
ACTN1-209ENST00000553659 PDK2Q15119 407 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 TAZQ16635 292 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 MFSD7Q6UXD7 560 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 SLC26A9Q7LBE3 791 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 TMPRSS7Q7RTY8 843 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 ADIPOR2Q86V24 386 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 AHI1Q8N157 1196 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.36■□□□□ 0.21
ACTN1-209ENST00000553659 CYB5D2Q8WUJ1 264 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 C1orf54Q8WWF1 131 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 SNX19Q92543 992 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 ART4Q93070 314 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 CCDC114Q96M63 670 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 ZIM3Q96PE6 472 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 FBRSQ9HAH7 460 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 ABCC13Q9NSE7 274 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 ABCB8Q9NUT2 735 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 TOR4AQ9NXH8 423 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 ASIC3Q9UHC3 531 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.36■□□□□ 0.21
ACTN1-209ENST00000553659 SNX24Q9Y343 169 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 ZFYVE26Q68DK2 2539 aa16.36■□□□□ 0.21
ACTN1-209ENST00000553659 YJEFN3A6XGL0 299 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 E7ENQ6 273 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 LIASO43766 372 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 PRPSAP2O60256 369 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 DKK1O94907 266 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 TRUB2O95900 331 aaKnown RBP16.35■□□□□ 0.21
ACTN1-209ENST00000553659 KDELR1P24390 212 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 HSD17B3P37058 310 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 PTPN9P43378 593 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 ZBTB16Q05516 673 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 DHX9Q08211 1270 aaKnown RBP16.35■□□□□ 0.21
ACTN1-209ENST00000553659 ADIGQ0VDE8 80 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 TFDP2Q14188 446 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 TERF2Q15554 542 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 TEAD4Q15561 434 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 PTPRNQ16849 979 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 KIF19Q2TAC6 998 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 EFHC1Q5JVL4 640 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 PMF1Q6P1K2 205 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 BBS12Q6ZW61 710 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 SCML4Q8N228 414 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 ZNF366Q8N895 744 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 RXFP2Q8WXD0 754 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 KCTD13Q8WZ19 329 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 EDEM1Q92611 657 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 HEMGNQ9BXL5 484 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 TRIM31Q9BZY9 425 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 BTBD1Q9H0C5 482 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 PRSS16Q9NQE7 514 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 GRHL1Q9NZI5 618 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 VPS18Q9P253 973 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 GGA2Q9UJY4 613 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 SNX11Q9Y5W9 270 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 SLCO1B1Q9Y6L6 691 aa16.35■□□□□ 0.21
ACTN1-209ENST00000553659 PLXNA2O75051 1894 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 GOLGA6CA6NDK9 693 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 SEMA4FO95754 770 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 ATP5BP06576 529 aaKnown RBP16.34■□□□□ 0.21
ACTN1-209ENST00000553659 ITGAVP06756 1048 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 DLDP09622 509 aaKnown RBP16.34■□□□□ 0.21
ACTN1-209ENST00000553659 ATXN1LP0C7T5 689 aaKnown RBP16.34■□□□□ 0.21
ACTN1-209ENST00000553659 GOLGA6DP0CG33 693 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 PABPC1P11940 636 aaKnown RBP16.34■□□□□ 0.21
ACTN1-209ENST00000553659 MIPP30301 263 aa16.34■□□□□ 0.21
ACTN1-209ENST00000553659 RPL21P46778 160 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms