RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 TMEM18Q96B42 140 aa6.94□□□□□ -1.3
PCNX1-205ENST00000553508 NPFFR1Q9GZQ6 430 aa6.94□□□□□ -1.3
PCNX1-205ENST00000553508 WDR6Q9NNW5 1121 aaKnown RBP6.94□□□□□ -1.3
PCNX1-205ENST00000553508 WNT16Q9UBV4 365 aa6.94□□□□□ -1.3
PCNX1-205ENST00000553508 FBXO40Q9UH90 709 aa6.94□□□□□ -1.3
PCNX1-205ENST00000553508 SUFUQ9UMX1 484 aa6.94□□□□□ -1.3
PCNX1-205ENST00000553508 URB2Q14146 1524 aaKnown RBP6.93□□□□□ -1.3
PCNX1-205ENST00000553508 A0A096LPK6 155 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 KDM4EB2RXH2 506 aaPredicted RBP6.93□□□□□ -1.3
PCNX1-205ENST00000553508 ITM2AO43736 263 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 ADAP00813 363 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 PRSS2P07478 247 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 TGFB3P10600 412 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 NAGAP17050 411 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 EGR4Q05215 589 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 SLC12A1Q13621 1099 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 RPE65Q16518 533 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 ZNF324BQ6AW86 544 aaPredicted RBP6.93□□□□□ -1.3
PCNX1-205ENST00000553508 LDHAL6AQ6ZMR3 332 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 TMC8Q8IU68 726 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 OR4N2Q8NGD1 307 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 TBC1D22AQ8WUA7 517 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 HSPH1Q92598 858 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 SLCO5A1Q9H2Y9 848 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 STN1Q9H668 368 aaKnown RBP6.93□□□□□ -1.3
PCNX1-205ENST00000553508 PROCRQ9UNN8 238 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 GDAQ9Y2T3 454 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 RAI2Q9Y5P3 530 aa6.93□□□□□ -1.3
PCNX1-205ENST00000553508 ASAP2O43150 1006 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 SERPINC1P01008 464 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 CBSLP0DN79 551 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 CBSP35520 551 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 NUDT6P53370 316 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 DSC1Q08554 894 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 CAPSQ13938 189 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 MYBPC2Q14324 1141 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 ANKRD1Q15327 319 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 SLC18A3Q16572 532 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 FJX1Q86VR8 437 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 TEX45Q8NA69 505 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 OR14A16Q8NHC5 309 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 WASF1Q92558 559 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 PYM1Q9BRP8 204 aaKnown RBP6.92□□□□□ -1.3
PCNX1-205ENST00000553508 HERPUD2Q9BSE4 406 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 SLC32A1Q9H598 525 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 MVB12BQ9H7P6 319 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 CNPY2Q9Y2B0 182 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 IFT140Q96RY7 1462 aa6.92□□□□□ -1.3
PCNX1-205ENST00000553508 ABCC8Q09428 1581 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 VWA3AA6NCI4 1184 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 GPR12P47775 334 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 ARSFP54793 590 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 DSCR9P59020 149 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 ASIC2Q16515 512 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 TDRD12Q587J7 1177 aaKnown RBP6.91□□□□□ -1.3
PCNX1-205ENST00000553508 FAM83HQ6ZRV2 1179 aaPredicted RBP6.91□□□□□ -1.3
PCNX1-205ENST00000553508 CHD1LQ86WJ1 897 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 ADHFE1Q8IWW8 467 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 RBFAQ8N0V3 343 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 ANKRD42Q8N9B4 389 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 GPT2Q8TD30 523 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 PHF21BQ96EK2 531 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 MROH8Q9H579 483 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 ENTPD7Q9NQZ7 604 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 RASSF1Q9NS23 344 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 IL36RNQ9UBH0 155 aa6.91□□□□□ -1.3
PCNX1-205ENST00000553508 GLUD1P00367 558 aa6.9□□□□□ -1.3
PCNX1-205ENST00000553508 CNPP09543 421 aaKnown RBP6.9□□□□□ -1.3
PCNX1-205ENST00000553508 ITGB8P26012 769 aa6.9□□□□□ -1.3
PCNX1-205ENST00000553508 GLUD2P49448 558 aa6.9□□□□□ -1.3
PCNX1-205ENST00000553508 PDLIM4P50479 330 aa6.9□□□□□ -1.3
PCNX1-205ENST00000553508 NFATC4Q14934 902 aa6.9□□□□□ -1.3
PCNX1-205ENST00000553508 PLCB4Q15147 1175 aa6.9□□□□□ -1.3
PCNX1-205ENST00000553508 FBXO47Q5MNV8 452 aa6.9□□□□□ -1.3
PCNX1-205ENST00000553508 CTAGE1Q96RT6 745 aa6.9□□□□□ -1.3
PCNX1-205ENST00000553508 MEIS3Q99687 375 aa6.9□□□□□ -1.3
PCNX1-205ENST00000553508 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.9□□□□□ -1.3
PCNX1-205ENST00000553508 SH2D7A6NKC9 451 aaPredicted RBP6.89□□□□□ -1.31
PCNX1-205ENST00000553508 IFRD1O00458 451 aaPredicted RBP6.89□□□□□ -1.31
PCNX1-205ENST00000553508 SLC18A2Q05940 514 aa6.89□□□□□ -1.31
PCNX1-205ENST00000553508 NAA25Q14CX7 972 aa6.89□□□□□ -1.31
PCNX1-205ENST00000553508 NADSYN1Q6IA69 706 aa6.89□□□□□ -1.31
PCNX1-205ENST00000553508 LURAP1LQ8IV03 231 aa6.89□□□□□ -1.31
PCNX1-205ENST00000553508 TMEM163Q8TC26 289 aa6.89□□□□□ -1.31
PCNX1-205ENST00000553508 GDPD5Q8WTR4 605 aa6.89□□□□□ -1.31
PCNX1-205ENST00000553508 ZSCAN31Q96LW9 406 aaPredicted RBP6.89□□□□□ -1.31
PCNX1-205ENST00000553508 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.89□□□□□ -1.31
PCNX1-205ENST00000553508 LMAN2LQ9H0V9 348 aa6.89□□□□□ -1.31
PCNX1-205ENST00000553508 CDT1Q9H211 546 aa6.89□□□□□ -1.31
PCNX1-205ENST00000553508 SELENONQ9NZV5 590 aa6.89□□□□□ -1.31
PCNX1-205ENST00000553508 CLDN16Q9Y5I7 305 aa6.89□□□□□ -1.31
PCNX1-205ENST00000553508 CNTNAP2Q9UHC6 1331 aa6.89□□□□□ -1.31
PCNX1-205ENST00000553508 CCDC88BA6NC98 1476 aa6.89□□□□□ -1.31
PCNX1-205ENST00000553508 AMTP48728 403 aa6.88□□□□□ -1.31
PCNX1-205ENST00000553508 TMED6Q8WW62 240 aa6.88□□□□□ -1.31
PCNX1-205ENST00000553508 CNOT9Q92600 299 aaKnown RBP6.88□□□□□ -1.31
PCNX1-205ENST00000553508 TWNKQ96RR1 684 aa6.88□□□□□ -1.31
PCNX1-205ENST00000553508 CLSTN3Q9BQT9 956 aa6.88□□□□□ -1.31
PCNX1-205ENST00000553508 ISCA1Q9BUE6 129 aa6.88□□□□□ -1.31
PCNX1-205ENST00000553508 TM6SF1Q9BZW5 370 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms