RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 AP1G1O43747 822 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 PRPSAP2O60256 369 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 ITGAVP06756 1048 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 AKT2P31751 481 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 RXRGP48443 463 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 RPS21P63220 83 aaKnown RBP13.17□□□□□ -0.3
ACTN1-207ENST00000553290 IL9RQ01113 521 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 RAD51Q06609 339 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 SERINC3Q13530 473 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 ACAP1Q15027 740 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 ZNF284Q2VY69 593 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 MYLK3Q32MK0 819 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 ZSCAN23Q3MJ62 389 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 PRAMEF14Q5SWL7 426 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 KIAA1161Q6NSJ0 714 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 LEKR1Q6ZMV7 388 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 SLCO6A1Q86UG4 719 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 VPS36Q86VN1 386 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 ZSCAN30Q86W11 494 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 PSTKQ8IV42 348 aaKnown RBP13.17□□□□□ -0.3
ACTN1-207ENST00000553290 TMEM145Q8NBT3 493 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 FAM174AQ8TBP5 190 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 SAP25Q8TEE9 199 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 RAB7BQ96AH8 199 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 HMCESQ96FZ2 354 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 KLHDC7BQ96G42 594 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 OSBPL1AQ9BXW6 950 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 KLK13Q9UKR3 277 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 MSRB2Q9Y3D2 182 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 TRPM6Q9BX84 2022 aa13.17□□□□□ -0.3
ACTN1-207ENST00000553290 TMEM8BA6NDV4 472 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 EEF2KO00418 725 aaKnown RBP13.16□□□□□ -0.3
ACTN1-207ENST00000553290 KRIT1O00522 736 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 SLC31A1O15431 190 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 TMCC1O94876 653 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 SERPING1P05155 500 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 PROS1P07225 676 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 PRLRP16471 622 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 HNRNPA2B1P22626 353 aaKnown RBP13.16□□□□□ -0.3
ACTN1-207ENST00000553290 ZNF135P52742 658 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-207ENST00000553290 NDST2P52849 883 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 ZBED6P86452 979 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 TMEM259Q4ZIN3 620 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 ZNF805Q5CZA5 627 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 HGSNATQ68CP4 663 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 PARS2Q7L3T8 475 aaKnown RBP13.16□□□□□ -0.3
ACTN1-207ENST00000553290 SPATS2Q86XZ4 545 aaKnown RBP13.16□□□□□ -0.3
ACTN1-207ENST00000553290 DNAAF5Q86Y56 855 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 ARFGAP1Q8N6T3 406 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 PNPLA1Q8N8W4 532 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 KLK6Q92876 244 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 GATA6Q92908 595 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 GDAP1L1Q96MZ0 367 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 SNRNP25Q9BV90 132 aaKnown RBP13.16□□□□□ -0.3
ACTN1-207ENST00000553290 DHX35Q9H5Z1 703 aaKnown RBP13.16□□□□□ -0.3
ACTN1-207ENST00000553290 GPATCH2LQ9NWQ4 482 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 MYO1AQ9UBC5 1043 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 PCSK1NQ9UHG2 260 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 CAPN11Q9UMQ6 739 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 ZFR2Q9UPR6 939 aaKnown RBP13.16□□□□□ -0.3
ACTN1-207ENST00000553290 LUC7L2Q9Y383 392 aaKnown RBP13.16□□□□□ -0.3
ACTN1-207ENST00000553290 FADS3Q9Y5Q0 445 aa13.16□□□□□ -0.3
ACTN1-207ENST00000553290 COL5A1P20908 1838 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-207ENST00000553290 ARHGAP42A6NI28 874 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 C16orf96A6NNT2 1141 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 C1QTNF9BB2RNN3 333 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 DAPK3O43293 454 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 TSPAN6O43657 245 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 DKK1O94907 266 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 IGSF6O95976 241 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 TPM3P06753 285 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 ATXN1LP0C7T5 689 aaKnown RBP13.15□□□□□ -0.3
ACTN1-207ENST00000553290 C1QTNF9P0C862 333 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 THEGLP0DJG4 465 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 EPHA8P29322 1005 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-207ENST00000553290 MIPP30301 263 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 GKP32189 559 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 RHOAP61586 193 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 SHBQ15464 509 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 CA9Q16790 459 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 ATXN7L2Q5T6C5 722 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-207ENST00000553290 SEL1L3Q68CR1 1132 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 GATAD2AQ86YP4 633 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 OR6K2Q8NGY2 324 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 CPLX3Q8WVH0 158 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 ARHGEF26Q96DR7 871 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 KLHL32Q96NJ5 620 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 PEBP4Q96S96 227 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 MYOCQ99972 504 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.15□□□□□ -0.3
ACTN1-207ENST00000553290 TMEM121BQ9BXQ6 578 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-207ENST00000553290 SLC17A9Q9BYT1 436 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 TRIM7Q9C029 511 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 KLC2Q9H0B6 622 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 LRRC19Q9H756 370 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 TOR4AQ9NXH8 423 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 IFNKQ9P0W0 207 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 UBA2Q9UBT2 640 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-207ENST00000553290 FTSJ1Q9UET6 329 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 CA5BQ9Y2D0 317 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms