RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 RETP07949 1114 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 PECAM1P16284 738 aaPredicted RBP16.6■□□□□ 0.25
GCN1-209ENST00000551920 TGM1P22735 817 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 DHPSP49366 369 aaPredicted RBP16.6■□□□□ 0.25
GCN1-209ENST00000551920 TAS2R38P59533 333 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 SNRPD1P62314 119 aaKnown RBP16.6■□□□□ 0.25
GCN1-209ENST00000551920 RFTN1Q14699 578 aaPredicted RBP16.6■□□□□ 0.25
GCN1-209ENST00000551920 LBRQ14739 615 aaKnown RBP16.6■□□□□ 0.25
GCN1-209ENST00000551920 CCDC6Q16204 474 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 IFI16Q16666 785 aaKnown RBP16.6■□□□□ 0.25
GCN1-209ENST00000551920 MYLK3Q32MK0 819 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 TFDP3Q5H9I0 405 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 DCAF12L1Q5VU92 463 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 FAM46CQ5VWP2 391 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 AADACL2Q6P093 401 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 ALYREFQ86V81 257 aaKnown RBP16.6■□□□□ 0.25
GCN1-209ENST00000551920 RNF10Q8N5U6 811 aaKnown RBP16.6■□□□□ 0.25
GCN1-209ENST00000551920 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.6■□□□□ 0.25
GCN1-209ENST00000551920 RUBCNQ92622 972 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 PSKH2Q96QS6 385 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 OMDQ99983 421 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 BTBD1Q9H0C5 482 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 SMOC1Q9H4F8 434 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 PARD6AQ9NPB6 346 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 LZTFL1Q9NQ48 299 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 NCDNQ9UBB6 729 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 SAE1Q9UBE0 346 aaPredicted RBP16.6■□□□□ 0.25
GCN1-209ENST00000551920 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.6■□□□□ 0.25
GCN1-209ENST00000551920 FARP1Q9Y4F1 1045 aaPredicted RBP16.6■□□□□ 0.25
GCN1-209ENST00000551920 HEY1Q9Y5J3 304 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 SLCO1B1Q9Y6L6 691 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 RIF1Q5UIP0 2472 aaKnown RBP16.59■□□□□ 0.25
GCN1-209ENST00000551920 BCLAF3A2AJT9 711 aaKnown RBP16.59■□□□□ 0.25
GCN1-209ENST00000551920 CCDC66A2RUB6 948 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 DDX3YO15523 660 aaKnown RBP16.59■□□□□ 0.25
GCN1-209ENST00000551920 KRT86O43790 486 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 NDUFS2O75306 463 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 PIGNO95427 931 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 UGT2B4P06133 528 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 ITPKAP23677 461 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 ITGB7P26010 798 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 MPLP40238 635 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 ZNF33AQ06730 810 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 PPP2R5EQ16537 467 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 SPDYCQ5MJ68 293 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 FAM182AQ5T1J6 154 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 LYSMD4Q5XG99 296 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 KAZNQ674X7 775 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 NCEH1Q6PIU2 408 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.59■□□□□ 0.25
GCN1-209ENST00000551920 PARS2Q7L3T8 475 aaKnown RBP16.59■□□□□ 0.25
GCN1-209ENST00000551920 PEX26Q7Z412 305 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 CCDC50Q8IVM0 306 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 RCOR2Q8IZ40 523 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 SYCE1Q8N0S2 351 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 CADM4Q8NFZ8 388 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 MAML1Q92585 1016 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 HDAC11Q96DB2 347 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 RBM41Q96IZ5 413 aaKnown RBP16.59■□□□□ 0.25
GCN1-209ENST00000551920 TSGA13Q96PP4 275 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 LGMNQ99538 433 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 CINPQ9BW66 212 aaPredicted RBP16.59■□□□□ 0.25
GCN1-209ENST00000551920 ARRDC1-AS1Q9H2J1 176 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 SGK2Q9HBY8 427 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 TMEM74BQ9NUR3 256 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 SEPT3Q9UH03 358 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 GMEB2Q9UKD1 530 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 DMXL1Q9Y485 3027 aa16.59■□□□□ 0.25
GCN1-209ENST00000551920 SDK1Q7Z5N4 2213 aa16.58■□□□□ 0.25
GCN1-209ENST00000551920 TTC24A2A3L6 582 aaPredicted RBP16.58■□□□□ 0.24
GCN1-209ENST00000551920 FAM47DPA6NHR8 397 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 SPINT1O43278 529 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 PLRG1O43660 514 aaKnown RBP16.58■□□□□ 0.24
GCN1-209ENST00000551920 CST8O60676 142 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 POP4O95707 220 aaKnown RBP16.58■□□□□ 0.24
GCN1-209ENST00000551920 IGHV4-34P06331 123 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 PYGMP11217 842 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 CR2P20023 1033 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 PPP2CBP62714 309 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 PPP2CAP67775 309 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 CREB5Q02930 508 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 PPIDQ08752 370 aaKnown RBP16.58■□□□□ 0.24
GCN1-209ENST00000551920 ODF2Q5BJF6 829 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 PLA2G2CQ5R387 149 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 B4GALNT4Q76KP1 1039 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 CYP2U1Q7Z449 544 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 LRRC49Q8IUZ0 686 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 TEX26Q8N6G2 289 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 OR14C36Q8NHC7 312 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 HES6Q96HZ4 224 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 MGME1Q9BQP7 344 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 ORAI3Q9BRQ5 295 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 HEMGNQ9BXL5 484 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 MAK16Q9BXY0 300 aaKnown RBP16.58■□□□□ 0.24
GCN1-209ENST00000551920 HDAC8Q9BY41 377 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 AMFRQ9UKV5 643 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 NCKAP1Q9Y2A7 1128 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.58■□□□□ 0.24
GCN1-209ENST00000551920 PCDHGA5Q9Y5G8 931 aa16.58■□□□□ 0.24
GCN1-209ENST00000551920 THADAQ6YHU6 1953 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms