RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 WDR59Q6PJI9 974 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 CLEC20AQ6ZU45 233 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 LARP4Q71RC2 724 aaKnown RBP eCLIP6.01□□□□□ -1.45
SCAF11-213ENST00000550629 ZNF571Q7Z3V5 609 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-213ENST00000550629 TMEM110Q86TL2 294 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 ITIH5Q86UX2 942 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 TTC30AQ86WT1 665 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 PALB2Q86YC2 1186 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 ZDHHC17Q8IUH5 632 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 SCML4Q8N228 414 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 DEFB123Q8N688 67 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 SPC24Q8NBT2 197 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 ATAD1Q8NBU5 361 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 LEMD2Q8NC56 503 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 SLC30A5Q8TAD4 765 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 SLC20A1Q8WUM9 679 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 SLC35F5Q8WV83 523 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 FOXRED1Q96CU9 486 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-213ENST00000550629 VCPIP1Q96JH7 1222 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 HSFY1Q96LI6 401 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 CCDC42Q96M95 316 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 GNRHR2Q96P88 292 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 PGLYRP2Q96PD5 576 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 LRRC37BQ96QE4 947 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 BAG1Q99933 345 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-213ENST00000550629 MED10Q9BTT4 135 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 TRIM62Q9BVG3 475 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 PDCL3Q9H2J4 239 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 HAUS4Q9H6D7 363 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 SFXN1Q9H9B4 322 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 CYP4F11Q9HBI6 524 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 IL37Q9NZH6 218 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 YIPF1Q9Y548 306 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 INSL5Q9Y5Q6 135 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 VWA8A3KMH1 1905 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 FAM92AA1XBS5 289 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 PATE3B3GLJ2 98 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 HHLA1C9JL84 531 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 F8VP50 259 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 CLDN5O00501 218 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 AKR1B10O60218 316 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 LCA5LO95447 670 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 SEC24AO95486 1093 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 CALB1P05937 261 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 JMJD7P0C870 316 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 CSH1P0DML2 217 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 CSH2P0DML3 217 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 MYBL1P10243 752 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 UNGP13051 313 aaPredicted RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 EPCAMP16422 314 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 ATF6P18850 670 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 TNFAIP3P21580 790 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 NSFP46459 744 aaKnown RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 GABRB2P47870 512 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 PPP3CCP48454 512 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 MAP3K7CLP57077 242 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 NOMO3P69849 1222 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 FMO1Q01740 532 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 ITIH3Q06033 890 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 HYAL1Q12794 435 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 PDCLQ13371 301 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 ADAM15Q13444 863 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 SLC18A3Q16572 532 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 C21orf62-AS1Q17RA5 79 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 CCDC142Q17RM4 750 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 ASTE1Q2TB18 679 aaPredicted RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 MGAT5BQ3V5L5 792 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 PABPC1LQ4VXU2 614 aaKnown RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 ZMAT1Q5H9K5 638 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 TCEAL5Q5H9L2 206 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 PPM1LQ5SGD2 360 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 TMEM200BQ69YZ2 307 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 PM20D1Q6GTS8 502 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 BEND5Q7L4P6 421 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 CCDC186Q7Z3E2 898 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 ADGRD2Q7Z7M1 963 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 PIGZQ86VD9 579 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 PHF13Q86YI8 300 aaPredicted RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 SCN4BQ8IWT1 228 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 LRRC8AQ8IWT6 810 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 NUP93Q8N1F7 819 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 ELMOD1Q8N336 334 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 ARHGAP18Q8N392 663 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 TXLNBQ8N3L3 684 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 WDTC1Q8N5D0 677 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 C1orf131Q8NDD1 294 aaKnown RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 OLIG1Q8TAK6 271 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 IPO4Q8TEX9 1081 aaKnown RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 OVCA2Q8WZ82 227 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 IRGQQ8WZA9 623 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 SECISBP2LQ93073 1101 aaKnown RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 PSMG2Q969U7 264 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 PABPC5Q96DU9 382 aaKnown RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 NEIL1Q96FI4 390 aaPredicted RBP6□□□□□ -1.45
SCAF11-213ENST00000550629 SCYL1Q96KG9 808 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 PPP1R13BQ96KQ4 1090 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 WWC2-AS2Q96NR7 200 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 SORCS2Q96PQ0 1159 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 KCNK16Q96T55 309 aa6□□□□□ -1.45
SCAF11-213ENST00000550629 CDX2Q99626 313 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms