RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CWC15Q9P013 229 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 UBA2Q9UBT2 640 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 DMTF1Q9Y222 760 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 UPK3BL1B0FP48 263 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 UPK3BL2E5RIL1 263 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 PRAMEF11O60813 436 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 GJB3O75712 270 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 TMEM253P0C7T8 217 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 RARAP10276 462 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 BNC1Q01954 994 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 SETMARQ53H47 684 aaPredicted RBP17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 ATXN7L2Q5T6C5 722 aaPredicted RBP17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 AFMIDQ63HM1 303 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 NAPEPLDQ6IQ20 393 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 NEK5Q6P3R8 708 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 PRPF39Q86UA1 669 aaKnown RBP17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 NPWQ8N729 165 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 SKA1Q96BD8 255 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 SERAC1Q96JX3 654 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 CHP1Q99653 195 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 GAREM1Q9H706 876 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 NHEJ1Q9H9Q4 299 aaPredicted RBP17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 PDFQ9HBH1 243 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 ANKRD6Q9Y2G4 727 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 PCNX2A6NKB5 2137 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 CEP295Q9C0D2 2601 aa17.51■□□□□ 0.39
CHMP1A-208ENST00000550102 RNF103O00237 685 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 VILLO15195 856 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 PROSCO94903 275 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 KCNK5O95279 499 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 POP4O95707 220 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 ZNF883P0CG24 379 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 ADRB3P13945 408 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 MAT2AP31153 395 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 PAPOLAP51003 745 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 C21orf59P57076 290 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 RAD51Q06609 339 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 SLC14A1Q13336 389 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 KRT81Q14533 505 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 HADHQ16836 314 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 KIF19Q2TAC6 998 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 FBXL19Q6PCT2 694 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 TMCO3Q6UWJ1 677 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 PARS2Q7L3T8 475 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 POLNQ7Z5Q5 900 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 ARHGAP12Q8IWW6 846 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 LZTR1Q8N653 840 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 CSPG4P5Q96PW8 444 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 SLC39A8Q9C0K1 460 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 SLC32A1Q9H598 525 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 EBF2Q9HAK2 575 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 SP110Q9HB58 689 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 PCDH18Q9HCL0 1135 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 SPTLC3Q9NUV7 552 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 RCOR3Q9P2K3 495 aaPredicted RBP17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 LHX3Q9UBR4 397 aa17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 FNDC3AQ9Y2H6 1198 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-208ENST00000550102 DFFAO00273 331 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 RNGTTO60942 597 aaKnown RBP17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 UGT2B4P06133 528 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 CEACAM1P13688 526 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 CD38P28907 300 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 GKP32189 559 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 MAN1A1P33908 653 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 GJC1P36383 396 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 HLA-BQ31612 363 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 MYLK3Q32MK0 819 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 SLC45A4Q5BKX6 768 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 ZNF805Q5CZA5 627 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 TXNRD3NBQ6F5E7 133 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 PIP4P1Q86T03 277 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 HORMAD1Q86X24 394 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 DEFB124Q8NES8 71 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 RBSNQ9H1K0 784 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 IL21RQ9HBE5 538 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 SNX11Q9Y5W9 270 aa17.49■□□□□ 0.39
CHMP1A-208ENST00000550102 LRRK1Q38SD2 2015 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 A0A1W2PQU0 124 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 J3KR12 359 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 AP1G1O43747 822 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 PCDH8O95206 1070 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 ADRB1P08588 477 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 CD59P13987 128 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 SERPINB6P35237 376 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 CTSKP43235 329 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 ZNF75DP51815 510 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 CDH6P55285 790 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 TSC1Q92574 1164 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 RAB7BQ96AH8 199 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 EXOC2Q96KP1 924 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 MFHAS1Q9Y4C4 1052 aa17.48■□□□□ 0.39
CHMP1A-208ENST00000550102 CHD8Q9HCK8 2581 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 PRAMEF26H0Y7S4 382 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 GIPC1O14908 333 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 AMPD1P23109 780 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 CCT8P50990 548 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 IL10RBQ08334 325 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 RFTN1Q14699 578 aaPredicted RBP17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 CYTH1Q15438 398 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 ZNF284Q2VY69 593 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms