RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 ANKRD20A4Q4UJ75 823 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 PKN3Q6P5Z2 889 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 PRPF39Q86UA1 669 aaKnown RBP12.73□□□□□ -0.37
CACNB3-212ENST00000549971 EXOC3L1Q86VI1 746 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 CTAGE3PQ8IX95 158 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 LMNTD2Q8IXW0 634 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 VN1R2Q8NFZ6 395 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 SPATA22Q8NHS9 363 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 DCAKDQ8WVC6 231 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 WBP2Q969T9 261 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 IFT43Q96FT9 208 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 CERS2Q96G23 380 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 SGSM3Q96HU1 749 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 SRPK1Q96SB4 655 aaKnown RBP12.73□□□□□ -0.37
CACNB3-212ENST00000549971 SEMA3CQ99985 751 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 NSUN3Q9H649 340 aaKnown RBP12.73□□□□□ -0.37
CACNB3-212ENST00000549971 NKIRAS1Q9NYS0 192 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 GDE1Q9NZC3 331 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 LMCD1Q9NZU5 365 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 ZFATQ9P243 1243 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 TCAF1Q9Y4C2 921 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 OR51B4Q9Y5P0 310 aa12.73□□□□□ -0.37
CACNB3-212ENST00000549971 NYNRINQ9P2P1 1898 aaKnown RBP12.72□□□□□ -0.37
CACNB3-212ENST00000549971 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-212ENST00000549971 F5H423 210 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-212ENST00000549971 PER2O15055 1255 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 INSIG1O15503 277 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 PRPF4O43172 522 aaKnown RBP eCLIP12.72□□□□□ -0.37
CACNB3-212ENST00000549971 PMPCBO75439 489 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 ZMPSTE24O75844 475 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 NDST3O95803 873 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 C1QAP02745 245 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 BRAFP15056 766 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 GJA1P17302 382 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 CR2P20023 1033 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 PBX2P40425 430 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 HADHAP40939 763 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 CSKP41240 450 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 NRIP1P48552 1158 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 SERPINH1P50454 418 aaKnown RBP12.72□□□□□ -0.37
CACNB3-212ENST00000549971 SGSHP51688 502 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 AP1S1P61966 158 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 CDK18Q07002 472 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 SLC1A5Q15758 541 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 SLC5A9Q2M3M2 681 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 STXBP5Q5T5C0 1151 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 DENND5AQ6IQ26 1287 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 ADGRD2Q7Z7M1 963 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 TDHQ8IZJ6 230 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 MPP5Q8N3R9 675 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 PPM1NQ8N819 430 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 CALML6Q8TD86 181 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 SCG3Q8WXD2 468 aaKnown RBP12.72□□□□□ -0.37
CACNB3-212ENST00000549971 SPOCK2Q92563 424 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 ZNF669Q96BR6 464 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-212ENST00000549971 TCEAL4Q96EI5 215 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 ALG14Q96F25 216 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 ZNF419Q96HQ0 510 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-212ENST00000549971 CPNE1Q99829 537 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 ADGRE3Q9BY15 652 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 SCUBE2Q9NQ36 999 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 SPHK2Q9NRA0 654 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 UBP1Q9NZI7 540 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 DENND4CQ5VZ89 1909 aa12.72□□□□□ -0.37
CACNB3-212ENST00000549971 HELZP42694 1942 aaKnown RBP12.71□□□□□ -0.37
CACNB3-212ENST00000549971 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-212ENST00000549971 A0A1W2PQ67 120 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 FAM47DPA6NHR8 397 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 ATP9BO43861 1147 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 USP12O75317 370 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 TMCC1O94876 653 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 CSPG5O95196 566 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 MT-ND3P03897 115 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 MMP2P08253 660 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 GP5P40197 560 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 POLD2P49005 469 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 CSE1LP55060 971 aaKnown RBP12.71□□□□□ -0.37
CACNB3-212ENST00000549971 RPL26P61254 145 aaKnown RBP12.71□□□□□ -0.37
CACNB3-212ENST00000549971 ARF5P84085 180 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 PDE1BQ01064 536 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 DSC2Q02487 901 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 NIPAL4Q0D2K0 466 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 GRM3Q14832 879 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 PLEKHG6Q3KR16 790 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 GRTP1Q5TC63 336 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 KIAA0930Q6ICG6 404 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-212ENST00000549971 TIFABQ6ZNK6 161 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 SPRED2Q7Z698 418 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 GPR149Q86SP6 731 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 RBM23Q86U06 439 aaKnown RBP12.71□□□□□ -0.37
CACNB3-212ENST00000549971 RASSF3Q86WH2 238 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 ARID3BQ8IVW6 561 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-212ENST00000549971 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
CACNB3-212ENST00000549971 PGBD5Q8N414 524 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 EFHBQ8N7U6 833 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.71□□□□□ -0.37
CACNB3-212ENST00000549971 ACMSDQ8TDX5 336 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 IRF7Q92985 503 aa12.71□□□□□ -0.37
CACNB3-212ENST00000549971 ISG20Q96AZ6 181 aaKnown RBP12.71□□□□□ -0.37
CACNB3-212ENST00000549971 TIFAQ96CG3 184 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms