RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 DEFB106AQ8N104 65 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 FAM26EQ8N5C1 309 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 C1orf131Q8NDD1 294 aaKnown RBP12.46□□□□□ -0.41
DDX54-206ENST00000549271 LIN37Q96GY3 246 aaPredicted RBP12.46□□□□□ -0.41
DDX54-206ENST00000549271 FEM1AQ9BSK4 669 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 FUCA2Q9BTY2 467 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 CALN1Q9BXU9 219 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 STK33Q9BYT3 514 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 FAM204AQ9H8W3 233 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 DDIT4Q9NX09 232 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 LIMA1Q9UHB6 759 aaKnown RBP12.46□□□□□ -0.41
DDX54-206ENST00000549271 PPM1HQ9ULR3 514 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 TBC1D30Q9Y2I9 924 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 SIK3Q9Y2K2 1263 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 PCDHGA4Q9Y5G9 962 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 SPENQ96T58 3664 aaKnown RBP12.45□□□□□ -0.42
DDX54-206ENST00000549271 DOPEY1Q5JWR5 2465 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 CACNA1DQ01668 2161 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 BLACEA4D250 179 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 MCF2LO15068 1137 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 EPHB6O15197 1021 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 CASC3O15234 703 aaKnown RBP12.45□□□□□ -0.42
DDX54-206ENST00000549271 CLDN11O75508 207 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 ERBB2P04626 1255 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 CYP11B1P15538 503 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 PRLRP16471 622 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 ZNF18P17022 549 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 CDH5P33151 784 aaPredicted RBP12.45□□□□□ -0.42
DDX54-206ENST00000549271 CCR10P46092 362 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 HNRNPKP61978 463 aaKnown RBP eCLIP12.45□□□□□ -0.42
DDX54-206ENST00000549271 TYRO3Q06418 890 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 AUHQ13825 339 aaKnown RBP12.45□□□□□ -0.42
DDX54-206ENST00000549271 PTPN20Q4JDL3 420 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 ZNF542PQ5EBM4 170 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 PERM1Q5SV97 790 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 CRTC1Q6UUV9 634 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 APTXQ7Z2E3 356 aaKnown RBP12.45□□□□□ -0.42
DDX54-206ENST00000549271 ABI3BPQ7Z7G0 1075 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 CIR1Q86X95 450 aaPredicted RBP12.45□□□□□ -0.42
DDX54-206ENST00000549271 ZNF548Q8NEK5 533 aaPredicted RBP12.45□□□□□ -0.42
DDX54-206ENST00000549271 ZNF397Q8NF99 534 aaPredicted RBP12.45□□□□□ -0.42
DDX54-206ENST00000549271 ZNF564Q8TBZ8 553 aaPredicted RBP12.45□□□□□ -0.42
DDX54-206ENST00000549271 OR8D1Q8WZ84 308 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 NOX5Q96PH1 765 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 MYOCQ99972 504 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 PREBQ9HCU5 417 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 GPR27Q9NS67 375 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 WDR70Q9NW82 654 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 TMEM51Q9NW97 253 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 SALL4Q9UJQ4 1053 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 CSNK1G3Q9Y6M4 447 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 LRRK1Q38SD2 2015 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 TRPM6Q9BX84 2022 aa12.45□□□□□ -0.42
DDX54-206ENST00000549271 C1QTNF3-AMACRE9PGA6 284 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 F8VZ95 297 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 PLD2O14939 933 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 SLC31A1O15431 190 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 LIPCP11150 499 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 WT1P19544 449 aaPredicted RBP12.44□□□□□ -0.42
DDX54-206ENST00000549271 SNX16P57768 344 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 MYL5Q02045 173 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 DLG2Q15700 870 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 SKIDA1Q1XH10 827 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 ZNF284Q2VY69 593 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 HIST2H2BCQ6DN03 193 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 OR6B2Q6IFH4 312 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 OLFML1Q6UWY5 402 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 GCNT7Q6ZNI0 430 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 FAM183BPQ6ZVS7 135 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 SLC26A9Q7LBE3 791 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 NOP9Q86U38 636 aaKnown RBP12.44□□□□□ -0.42
DDX54-206ENST00000549271 SH2D3CQ8N5H7 860 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 OR52K2Q8NGK3 314 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 WDR48Q8TAF3 677 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 HTR3CQ8WXA8 447 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 RNF34Q969K3 372 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 RPRD1AQ96P16 312 aaPredicted RBP12.44□□□□□ -0.42
DDX54-206ENST00000549271 ADNPQ9H2P0 1102 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 FZD3Q9NPG1 666 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 DNAJC28Q9NX36 388 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 RRN3Q9NYV6 651 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 SLC25A13Q9UJS0 675 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 HS3ST2Q9Y278 367 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 HS3ST4Q9Y661 456 aa12.44□□□□□ -0.42
DDX54-206ENST00000549271 CRYBG3Q68DQ2 2970 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 CELSR2Q9HCU4 2923 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 A0A1W2PQU0 124 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 DAB1O75553 588 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 GRAP2O75791 330 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 CSF2P04141 144 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 NME1P15531 152 aaKnown RBP12.43□□□□□ -0.42
DDX54-206ENST00000549271 HNRNPA2B1P22626 353 aaKnown RBP12.43□□□□□ -0.42
DDX54-206ENST00000549271 AKT2P31751 481 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 NOS2P35228 1153 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 UGT1A5P35504 534 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 CASRP41180 1078 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 GABRB2P47870 512 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 CDH4P55283 916 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 JAM2P57087 298 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 CLDN2P57739 230 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms