RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CASQ1P31415 396 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 CD151P48509 253 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 INHBCP55103 352 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 MPPE1Q53F39 396 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 CCDC122Q5T0U0 273 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 LMBRD2Q68DH5 695 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 CAMKMTQ7Z624 323 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 PIGZQ86VD9 579 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 DCP2Q8IU60 420 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 TRIM42Q8IWZ5 723 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 TMEM151AQ8N4L1 468 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 LOXL4Q96JB6 756 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 EXOC2Q96KP1 924 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 SIGLEC10Q96LC7 697 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 KIFC3Q9BVG8 833 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 CNOT10Q9H9A5 744 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 LRRC40Q9H9A6 602 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 RRAGDQ9NQL2 400 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ENTPD7Q9NQZ7 604 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 NLE1Q9NVX2 485 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 GIN1Q9NXP7 522 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ADAM22Q9P0K1 906 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 SLC12A6Q9UHW9 1150 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 PPM1HQ9ULR3 514 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 NTNG1Q9Y2I2 539 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 TET1Q8NFU7 2136 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 A0A1B0GVM2 712 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 USP27XA6NNY8 438 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 QSOX1O00391 747 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PPEF2O14830 753 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TM9SF1O15321 606 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 ERLIN1O75477 346 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 AGTP01019 485 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 KRT3P12035 628 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 RRM1P23921 792 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 GALNSP34059 522 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 THPOP40225 353 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 NOP2P46087 812 aaKnown RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PCYT1AP49585 367 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 SLC5A3P53794 718 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TAS2R40P59535 323 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 BEX3Q00994 111 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 FZD5Q13467 585 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TRPC3Q13507 836 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 MAP7Q14244 749 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 RPS6KA1Q15418 735 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 DNAJC21Q5F1R6 531 aaKnown RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PIK3R6Q5UE93 754 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TTC27Q6P3X3 843 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 MFSD6LQ8IWD5 586 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 SLC35F6Q8N357 371 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TTC30BQ8N4P2 665 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TEX19Q8NA77 164 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PJA1Q8NG27 643 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 CPB2Q96IY4 423 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 ZC3H10Q96K80 434 aaKnown RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 SPATA9Q9BWV2 254 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PABPC3Q9H361 631 aaKnown RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TLE6Q9H808 572 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TMBIM4Q9HC24 238 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 CLEC1BQ9P126 229 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PCDHB4Q9Y5E5 795 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PCDHB12Q9Y5F1 795 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 LRRD1A4D1F6 860 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 CCDC169A6NNP5 214 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 ENC1O14682 589 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PCDH17O14917 1159 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TYROBPO43914 113 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PAGE1O75459 146 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 RFPL3O75679 317 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 GM2AP17900 193 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 MLH1P40692 756 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 ETV4P43268 484 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 DGKGP49619 791 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 RPA4Q13156 261 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 ADGRF1Q5T601 910 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 MACC1Q6ZN28 852 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 KANSL1Q7Z3B3 1105 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 CELF5Q8N6W0 485 aaKnown RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 C2CD4AQ8NCU7 369 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 STKLD1Q8NE28 680 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 DIS3LQ8TF46 1054 aaKnown RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TRAPPC12Q8WVT3 735 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 SH3KBP1Q96B97 665 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 SAAL1Q96ER3 474 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 COQ10AQ96MF6 247 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PSD2Q9BQI7 771 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 C1QTNF1Q9BXJ1 281 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 EHD1Q9H4M9 534 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 ABCF3Q9NUQ8 709 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 DLGAP2Q9P1A6 1054 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 TRIM17Q9Y577 477 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 AGPSO00116 658 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 CLIC2O15247 247 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 STC2O76061 302 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 PLEKP08567 350 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-212ENST00000549162 RARAP10276 462 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 MIPP30301 263 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 CCR1P32246 355 aa4.97□□□□□ -1.61
SCAF11-212ENST00000549162 GCKP35557 465 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms