RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ENTPD2Q9Y5L3 495 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 C16orf96A6NNT2 1141 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 GP1BAP07359 652 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 ACVRL1P37023 503 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 ABL2P42684 1182 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 SERPINH1P50454 418 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 CLCN6P51797 869 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 ERVPABLB-1P60509 514 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 ARF5P84085 180 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 VAC14Q08AM6 782 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 EIF2B5Q13144 721 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 MTA1Q13330 715 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 RAB6CQ53S08 254 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 KIAA1161Q6NSJ0 714 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 RETSATQ6NUM9 610 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 ZCCHC8Q6NZY4 707 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 KYAT3Q6YP21 454 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 PARGQ86W56 976 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 FAM131BQ86XD5 332 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 FAM181AQ8N9Y4 354 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 ZNF397Q8NF99 534 aaPredicted RBP12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 IFT43Q96FT9 208 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 FAM81BQ96LP2 452 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 CFAP57Q96MR6 1250 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 MAGEB5Q9BZ81 275 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 RAB6CQ9H0N0 254 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 KIAA1468Q9P260 1216 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 GULP1Q9UBP9 304 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 DNAI1Q9UI46 699 aa12.17□□□□□ -0.46
TRAFD1-205ENST00000548277 MGAQ8IWI9 3026 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 ARHGEF17Q96PE2 2063 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 ILVBLA1L0T0 632 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 KRIT1O00522 736 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 MMP20O60882 483 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 GCATO75600 419 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 ZMPSTE24O75844 475 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 DXOO77932 396 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 TNFSF15O95150 251 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 F9P00740 461 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 NME1P15531 152 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 ITIH2P19823 946 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 ITGB7P26010 798 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 FLT3P36888 993 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 RABIFP47224 123 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 UCNP55089 124 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 UBE2HP62256 183 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 ATP11AP98196 1134 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 GNA12Q03113 381 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 RAPGEF1Q13905 1077 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 NR0B2Q15466 257 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 SLC25A52Q3SY17 297 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 HSP90AA4PQ58FG1 418 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 PRRT3Q5FWE3 981 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 FAXCQ5TGI0 409 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 TRNP1Q6NT89 227 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 RBM44Q6ZP01 1051 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 VPS36Q86VN1 386 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 ZNF354CQ86Y25 554 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 C18orf8Q96DM3 657 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 C1orf74Q96LT6 269 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 SLC46A1Q96NT5 459 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 KLF6Q99612 283 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 DPH1Q9BZG8 443 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 ZYG11BQ9C0D3 744 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 SIX2Q9NPC8 291 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 NDFIP2Q9NV92 336 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 RRN3Q9NYV6 651 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 SCN8AQ9UQD0 1980 aa12.16□□□□□ -0.46
TRAFD1-205ENST00000548277 EME2A4GXA9 379 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 CYSRT1A8MQ03 144 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 B8ZZF3 427 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 CD160O95971 181 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 UGT2B4P06133 528 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 THOP1P52888 689 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 CDO1Q16878 200 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 TPD52L1Q16890 204 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 ATXN7L2Q5T6C5 722 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 RWDD4Q6NW29 188 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 CCDC81Q6ZN84 652 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 RD3Q7Z3Z2 195 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 TTC7BQ86TV6 843 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 XYLT1Q86Y38 959 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 ZDHHC17Q8IUH5 632 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 PCDH20Q8N6Y1 951 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 EMC1Q8N766 993 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 TMEM35BQ8NCS4 154 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 FAM174AQ8TBP5 190 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 CPA5Q8WXQ8 436 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 TTC9Q92623 222 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 PRR11Q96HE9 360 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 KLHL32Q96NJ5 620 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 C1QTNF2Q9BXJ5 285 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 USP29Q9HBJ7 922 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 SIRPGQ9P1W8 387 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 SPASTQ9UBP0 616 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 APOBEC3BQ9UH17 382 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 RWDD2AQ9UIY3 292 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 SALL4Q9UJQ4 1053 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 PNMA8BQ9ULN7 279 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms