RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 PPP1R14AQ96A00 147 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 TUBGCP3Q96CW5 907 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 FEM1CQ96JP0 617 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 CENPOQ9BU64 300 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 ANLNQ9NQW6 1124 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 KLHL3Q9UH77 587 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 GRID1Q9ULK0 1009 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 GTF2A1LQ9UNN4 478 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 AURKCQ9UQB9 309 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 MYH9P35579 1960 aaKnown RBP8.71□□□□□ -1.02
CLIP1-218ENST00000545889 ERI2A8K979 691 aaKnown RBP8.71□□□□□ -1.02
CLIP1-218ENST00000545889 ISM1B1AKI9 464 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 FAM155AB1AL88 458 aaPredicted RBP8.71□□□□□ -1.02
CLIP1-218ENST00000545889 KCNK1O00180 336 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 TRDMT1O14717 391 aaKnown RBP8.71□□□□□ -1.02
CLIP1-218ENST00000545889 ZBTB14O43829 449 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 CCDC22O60826 627 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 PHF2O75151 1096 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 ENTPD5O75356 428 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 GCATO75600 419 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 SERPINI2O75830 405 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 C8AP07357 584 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 SOX11P35716 441 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 MMP13P45452 471 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 CCR3P51677 355 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 KCNK10P57789 538 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 PTK7Q13308 1070 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 LACTB2Q53H82 288 aaPredicted RBP8.71□□□□□ -1.02
CLIP1-218ENST00000545889 TMEM164Q5U3C3 297 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 THOC7Q6I9Y2 204 aaKnown RBP8.71□□□□□ -1.02
CLIP1-218ENST00000545889 PPIL6Q8IXY8 311 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 ZNF516Q92618 1163 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 PPP1R14BQ96C90 147 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 ARHGAP9Q9BRR9 750 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 CNPPD1Q9BV87 410 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 ARMC7Q9H6L4 198 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 ZSCAN32Q9NX65 697 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 KLHL28Q9NXS3 571 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 PSME2Q9UL46 239 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 ZNF510Q9Y2H8 683 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 GSAPA4D1B5 854 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 ARVCFO00192 962 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 KRT6AP02538 564 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 C4BPAP04003 597 aaKnown RBP8.7□□□□□ -1.02
CLIP1-218ENST00000545889 KRT6BP04259 564 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 PAEPP09466 180 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 CYP2F1P24903 491 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 CHI3L1P36222 383 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-218ENST00000545889 KRT6CP48668 564 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 ZNF268Q14587 947 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-218ENST00000545889 ITIH4Q14624 930 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 INAVAQ3KP66 663 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 C6orf89Q6UWU4 347 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 SCUBE1Q8IWY4 988 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 TMEM130Q8N3G9 435 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 OR10G6Q8NH81 332 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 GPR152Q8TDT2 470 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 CAVIN3Q969G5 261 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 GTPBP2Q9BX10 602 aaKnown RBP8.7□□□□□ -1.02
CLIP1-218ENST00000545889 GPAMQ9HCL2 828 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 AJAP1Q9UKB5 411 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-218ENST00000545889 RAD51CO43502 376 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 ATP6V1B1P15313 513 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 ACADSP16219 412 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 DRD4P21917 467 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 SULT2A1Q06520 285 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 FLOT2Q14254 428 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 ATAD3BQ5T9A4 648 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 FUT10Q6P4F1 479 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 NLRP9Q7RTR0 991 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 LRRC6Q86X45 466 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 POMGNT2Q8NAT1 580 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 SHC3Q92529 594 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 MYLPFQ96A32 169 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 BBS4Q96RK4 519 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 RBBP8Q99708 897 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 THUMPD3Q9BV44 507 aaKnown RBP8.7□□□□□ -1.02
CLIP1-218ENST00000545889 RSPH9Q9H1X1 276 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-218ENST00000545889 PHPT1Q9NRX4 125 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-218ENST00000545889 FBXO9Q9UK97 447 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-218ENST00000545889 ADAM28Q9UKQ2 775 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 PER2O15055 1255 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 TIMM44O43615 452 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 ACSL4O60488 711 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 STBD1O95210 358 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 TYMPP19971 482 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 TLX1P31314 330 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-218ENST00000545889 PBX3P40426 434 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 PLIN5Q00G26 463 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 ALDH6A1Q02252 535 aaKnown RBP8.7□□□□□ -1.02
CLIP1-218ENST00000545889 HSPA14Q0VDF9 509 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 TFDP3Q5H9I0 405 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 TMEM40Q8WWA1 233 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 WNT8BQ93098 351 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 HHIPL1Q96JK4 782 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 MLPHQ9BV36 600 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-218ENST00000545889 GID8Q9NWU2 228 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 CTNNAL1Q9UBT7 734 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 ZFP69BQ9UJL9 534 aa8.7□□□□□ -1.02
CLIP1-218ENST00000545889 RCCD1A6NED2 376 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms