RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 GALNT1Q10472 559 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-222ENST00000544585 PRPF4BQ13523 1007 aaKnown RBP6.51□□□□□ -1.37
CPSF7-222ENST00000544585 RAB32Q13637 225 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 RTP5Q14D33 572 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 MAPK6Q16659 721 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 DCAF4L1Q3SXM0 396 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 MZT2AQ6P582 158 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 TRMT10BQ6PF06 316 aaKnown RBP6.51□□□□□ -1.37
CPSF7-222ENST00000544585 CD300LGQ6UXG3 332 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 MAATS1Q7Z4T9 603 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 CLEC14AQ86T13 490 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 SDR16C5Q8N3Y7 309 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 KYQ8NBH2 561 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 PLA2G15Q8NCC3 412 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 NAXEQ8NCW5 288 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 MCPH1Q8NEM0 835 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 APPL2Q8NEU8 664 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 HAS1Q92839 578 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 GCDHQ92947 438 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-222ENST00000544585 EXOC4Q96A65 974 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 DPH1Q9BZG8 443 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 ZNF518BQ9C0D4 1074 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 C11orf54Q9H0W9 315 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-222ENST00000544585 ZNF552Q9H707 407 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-222ENST00000544585 ITM2CQ9NQX7 267 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 ASAH2Q9NR71 780 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 TM7SF3Q9NS93 570 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 CEP72Q9P209 647 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 CACNG4Q9UBN1 327 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 SLC8A2Q9UPR5 921 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 INSL5Q9Y5Q6 135 aa6.51□□□□□ -1.37
CPSF7-222ENST00000544585 PATJQ8NI35 1801 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 NID2Q14112 1375 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 SMIM28A0A1B0GU29 152 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 C4orf47A7E2U8 309 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 LGALS16A8MUM7 142 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 PODXLO00592 558 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 SLC37A4O43826 429 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 MOSPD3O75425 235 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 SEC24AO95486 1093 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 FGF19O95750 216 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 PYGLP06737 847 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 CSRP1P21291 193 aaKnown RBP6.5□□□□□ -1.37
CPSF7-222ENST00000544585 RDXP35241 583 aaKnown RBP6.5□□□□□ -1.37
CPSF7-222ENST00000544585 MPLP40238 635 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 CCR2P41597 374 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 ETV4P43268 484 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 BRCC3P46736 316 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 RARRES1P49788 294 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 NOVA1P51513 510 aaKnown RBP6.5□□□□□ -1.37
CPSF7-222ENST00000544585 EFNA5P52803 228 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 ITGA8P53708 1063 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 EPHB3P54753 998 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 NCKAP1LP55160 1127 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 NOMO3P69849 1222 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 TWF1Q12792 350 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 PLD1Q13393 1074 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 POSTNQ15063 836 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 TEAD2Q15562 447 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 CTXN3Q4LDR2 81 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 ALKAL1Q6UXT8 129 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 ZNF605Q86T29 641 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 KBTBD6Q86V97 674 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 ARID3BQ8IVW6 561 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-222ENST00000544585 LILRA3Q8N6C8 439 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-222ENST00000544585 IPCEF1Q8WWN9 437 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-222ENST00000544585 C18orf8Q96DM3 657 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 ZNF274Q96GC6 653 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-222ENST00000544585 UBXN10Q96LJ8 280 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 PPM1MQ96MI6 270 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 PPP1R10Q96QC0 940 aaKnown RBP6.5□□□□□ -1.37
CPSF7-222ENST00000544585 SORBS1Q9BX66 1292 aaKnown RBP6.5□□□□□ -1.37
CPSF7-222ENST00000544585 POLR3FQ9H1D9 316 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-222ENST00000544585 PDZD7Q9H5P4 517 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 SLITRK6Q9H5Y7 841 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 CNTD2Q9H8S5 307 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 FBXL5Q9UKA1 691 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 ITGB1BP2Q9UKP3 347 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 GDAQ9Y2T3 454 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 ASB3Q9Y575 518 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 NOTCH4Q99466 2003 aa6.5□□□□□ -1.37
CPSF7-222ENST00000544585 TDRD15B5MCY1 1934 aaKnown RBP6.5□□□□□ -1.37
CPSF7-222ENST00000544585 USP24Q9UPU5 2620 aa6.49□□□□□ -1.37
CPSF7-222ENST00000544585 SRRM3A6NNA2 597 aaPredicted RBP6.49□□□□□ -1.37
CPSF7-222ENST00000544585 SLC38A8A6NNN8 435 aa6.49□□□□□ -1.37
CPSF7-222ENST00000544585 J3KRW8 73 aa6.49□□□□□ -1.37
CPSF7-222ENST00000544585 SYT5O00445 386 aa6.49□□□□□ -1.37
CPSF7-222ENST00000544585 NPC1O15118 1278 aa6.49□□□□□ -1.37
CPSF7-222ENST00000544585 MATN4O95460 622 aa6.49□□□□□ -1.37
CPSF7-222ENST00000544585 CNOT4O95628 575 aaKnown RBP6.49□□□□□ -1.37
CPSF7-222ENST00000544585 CAVIN2O95810 425 aa6.49□□□□□ -1.37
CPSF7-222ENST00000544585 ABHD16AO95870 558 aa6.49□□□□□ -1.37
CPSF7-222ENST00000544585 PRKCBP05771 671 aa6.49□□□□□ -1.37
CPSF7-222ENST00000544585 MTHFD1P11586 935 aaKnown RBP6.49□□□□□ -1.37
CPSF7-222ENST00000544585 RPS6KB1P23443 525 aa6.49□□□□□ -1.37
CPSF7-222ENST00000544585 CARSP49589 748 aaKnown RBP6.49□□□□□ -1.37
CPSF7-222ENST00000544585 FOXO1Q12778 655 aa6.49□□□□□ -1.37
CPSF7-222ENST00000544585 GRSF1Q12849 480 aaKnown RBP eCLIP6.49□□□□□ -1.37
CPSF7-222ENST00000544585 SP140Q13342 867 aa6.49□□□□□ -1.37
CPSF7-222ENST00000544585 TOP3AQ13472 1001 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms