RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 MIIPQ5JXC2 388 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 RASSF6Q6ZTQ3 369 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 ITIH5Q86UX2 942 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 PIWIL2Q8TC59 973 aaKnown RBP15.59■□□□□ 0.09
CHD4-210ENST00000544040 PWWP2AQ96N64 755 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 RPS6KA6Q9UK32 745 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 LSM1O15116 133 aaKnown RBP15.59■□□□□ 0.09
CHD4-210ENST00000544040 IRF8Q02556 426 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 PLD1Q13393 1074 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 RRP1BQ14684 758 aaKnown RBP15.59■□□□□ 0.09
CHD4-210ENST00000544040 PAGE2BQ5JRK9 111 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 PPP1R26Q5T8A7 1209 aaPredicted RBP15.59■□□□□ 0.09
CHD4-210ENST00000544040 UNC5AQ6ZN44 842 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 ULK2Q8IYT8 1036 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 ANKRD13AQ8IZ07 590 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 DAW1Q8N136 415 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 PMM1Q92871 262 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 COX4I2Q96KJ9 171 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 MYO5CQ9NQX4 1742 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 MSX2P35548 267 aaPredicted RBP15.59■□□□□ 0.09
CHD4-210ENST00000544040 SRSF11Q05519 484 aaKnown RBP15.59■□□□□ 0.09
CHD4-210ENST00000544040 TBX2Q13207 712 aaPredicted RBP15.59■□□□□ 0.09
CHD4-210ENST00000544040 MAPKAPK3Q16644 382 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 KCTD4Q8WVF5 259 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 PGM2Q96G03 612 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 ZBTB45Q96K62 511 aaPredicted RBP15.59■□□□□ 0.09
CHD4-210ENST00000544040 COPS4Q9BT78 406 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 FBXO44Q9H4M3 255 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 MROH8Q9H579 483 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 SNX6Q9UNH7 406 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 CCDC162PA2VCL2 907 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 SNX3O60493 162 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 NTSR2O95665 410 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 PDHA2P29803 388 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 NR1H2P55055 460 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 ZNF846Q147U1 533 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 PREPLQ4J6C6 727 aaPredicted RBP15.58■□□□□ 0.09
CHD4-210ENST00000544040 SLC45A4Q5BKX6 768 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 MTX3Q5HYI7 312 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 TTC23Q5W5X9 447 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 RBM43Q6ZSC3 357 aaKnown RBP15.58■□□□□ 0.09
CHD4-210ENST00000544040 PLEKHH3Q7Z736 793 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 TRPV3Q8NET8 790 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 RCN3Q96D15 328 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 Q96MT0 163 aa15.58■□□□□ 0.09
CHD4-210ENST00000544040 CDK5RAP1Q96SZ6 601 aaKnown RBP15.58■□□□□ 0.09
CHD4-210ENST00000544040 STX16-NPEPL1H3BU86 382 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 STX16O14662 325 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 LYPLA1O75608 230 aaPredicted RBP15.58■□□□□ 0.08
CHD4-210ENST00000544040 KDELR1P24390 212 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 MARSP56192 900 aaKnown RBP15.58■□□□□ 0.08
CHD4-210ENST00000544040 TRAP1Q12931 704 aaKnown RBP15.58■□□□□ 0.08
CHD4-210ENST00000544040 NAB1Q13506 487 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 APTXQ7Z2E3 356 aaKnown RBP15.58■□□□□ 0.08
CHD4-210ENST00000544040 RAD51AP1Q96B01 352 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 DSN1Q9H410 356 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 TRIM38O00635 465 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 NR2F1P10589 423 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 CHKAP35790 457 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 ABL2P42684 1182 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 INSCQ1MX18 579 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 C4orf19Q8IY42 314 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 PJA1Q8NG27 643 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 NELL1Q92832 810 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 NEO1Q92859 1461 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 KRT33AO76009 404 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 C9P02748 559 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 S100A6P06703 90 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 INTS11Q5TA45 600 aaKnown RBP15.58■□□□□ 0.08
CHD4-210ENST00000544040 CYP2W1Q8TAV3 490 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 GMCL1Q96IK5 515 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 SERPINB11Q96P15 392 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 GSDMCQ9BYG8 508 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 ABCB9Q9NP78 766 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 ING3Q9NXR8 418 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 NKIRAS2Q9NYR9 191 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 SSR3Q9UNL2 185 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 SAMHD1Q9Y3Z3 626 aaKnown RBP15.58■□□□□ 0.08
CHD4-210ENST00000544040 PMF1-BGLAPU3KQ54 211 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 KLRC2P26717 231 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 UGT2B15P54855 530 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 FCHO2Q0JRZ9 810 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 GRIK4Q16099 956 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 CXXC5Q7LFL8 322 aaKnown RBP15.58■□□□□ 0.08
CHD4-210ENST00000544040 GORASP1Q9BQQ3 440 aa15.58■□□□□ 0.08
CHD4-210ENST00000544040 R3HDM2Q9Y2K5 976 aaKnown RBP15.58■□□□□ 0.08
CHD4-210ENST00000544040 TISP43B9A030 160 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 LOC110117498-PIK3R3F6TDL0 507 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 PFKPQ01813 784 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 PARP6Q2NL67 630 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 NEPROQ6NW34 567 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 TNS4Q8IZW8 715 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 TBCBQ99426 244 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 ANGPT4Q9Y264 503 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 DGKBQ9Y6T7 804 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 SLC5A9Q2M3M2 681 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 RNF43Q68DV7 783 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 GALNT5Q7Z7M9 940 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 CDYL2Q8N8U2 506 aa15.57■□□□□ 0.08
CHD4-210ENST00000544040 MECRQ9BV79 373 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms