RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 INSIG1O15503 277 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 GJB3O75712 270 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 CD6P30203 668 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 PPIDQ08752 370 aaKnown RBP15.31■□□□□ 0.04
CD9-210ENST00000543916 ZNF235Q14590 738 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 MARC1Q5VT66 337 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 FAM46CQ5VWP2 391 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 TIGD7Q6NT04 549 aaPredicted RBP15.31■□□□□ 0.04
CD9-210ENST00000543916 USP30Q70CQ3 517 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 B4GALNT4Q76KP1 1039 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 HDDC3Q8N4P3 179 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 TEX26Q8N6G2 289 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 SUMF1Q8NBK3 374 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 GANCQ8TET4 914 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 MAML1Q92585 1016 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 FATE1Q969F0 183 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 TOE1Q96GM8 510 aaKnown RBP15.31■□□□□ 0.04
CD9-210ENST00000543916 ZC3H10Q96K80 434 aaKnown RBP15.31■□□□□ 0.04
CD9-210ENST00000543916 PSKH2Q96QS6 385 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 WSB2Q9NYS7 404 aaPredicted RBP15.31■□□□□ 0.04
CD9-210ENST00000543916 SEPT3Q9UH03 358 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 SMG5Q9UPR3 1016 aaKnown RBP15.31■□□□□ 0.04
CD9-210ENST00000543916 EFR3BQ9Y2G0 817 aa15.31■□□□□ 0.04
CD9-210ENST00000543916 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 APOC4-APOC2K7ER74 178 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 MAP3K13O43283 966 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 RNASEH2AO75792 299 aaKnown RBP15.3■□□□□ 0.04
CD9-210ENST00000543916 POP4O95707 220 aaKnown RBP15.3■□□□□ 0.04
CD9-210ENST00000543916 APOC2P02655 101 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 OXTRP30559 389 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 ACSL1P33121 698 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 MMP13P45452 471 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 NR2C2P49116 596 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 CNTN1Q12860 1018 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 HNRNPDQ14103 355 aaKnown RBP15.3■□□□□ 0.04
CD9-210ENST00000543916 PDK1Q15118 436 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 RPS6KA1Q15418 735 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 FAM182AQ5T1J6 154 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 PMS2CLQ68D20 193 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 SLC36A4Q6YBV0 504 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 SRLQ86TD4 932 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 CCDC13Q8IYE1 715 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 TMEFF1Q8IYR6 380 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 NSMCE1Q8WV22 266 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 P3H4Q92791 437 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 FAM131CQ96AQ9 280 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 NSMCE3Q96MG7 304 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 OMDQ99983 421 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 TLR10Q9BXR5 811 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 NEUROG2Q9H2A3 272 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 NT5MQ9NPB1 228 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 FZD4Q9ULV1 537 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 NCKAP1Q9Y2A7 1128 aa15.3■□□□□ 0.04
CD9-210ENST00000543916 TTC24A2A3L6 582 aaPredicted RBP15.29■□□□□ 0.04
CD9-210ENST00000543916 KCNK1O00180 336 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 PPP1R12AO14974 1030 aaPredicted RBP15.29■□□□□ 0.04
CD9-210ENST00000543916 PIGNO95427 931 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 UGT2B4P06133 528 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 CCNB1P14635 433 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 CETN2P41208 172 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 CSNK1DP48730 415 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 RENBPP51606 427 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 MAXP61244 160 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 RPL6Q02878 288 aaKnown RBP15.29■□□□□ 0.04
CD9-210ENST00000543916 AP1B1Q10567 949 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 ZBTB17Q13105 803 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 PRKD1Q15139 912 aaPredicted RBP15.29■□□□□ 0.04
CD9-210ENST00000543916 NOMO1Q15155 1222 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 AGBL4Q5VU57 503 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.29■□□□□ 0.04
CD9-210ENST00000543916 PARS2Q7L3T8 475 aaKnown RBP15.29■□□□□ 0.04
CD9-210ENST00000543916 C11orf74Q86VG3 221 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 DEFB119Q8N690 84 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 UBE2Q2Q8WVN8 375 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 MGME1Q9BQP7 344 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 GPR174Q9BXC1 333 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 SEMA4AQ9H3S1 761 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 CACNA1HO95180 2353 aa15.29■□□□□ 0.04
CD9-210ENST00000543916 SPAG17Q6Q759 2223 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 TCRBV7S2A1N4TA0A589 114 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 NDUFS2O75306 463 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 TJP3O95049 919 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 CR2P20023 1033 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 ITGB7P26010 798 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 HSPA9P38646 679 aaKnown RBP15.28■□□□□ 0.04
CD9-210ENST00000543916 SCNN1BP51168 640 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 ADPRHP54922 357 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 IFI35P80217 286 aaPredicted RBP15.28■□□□□ 0.04
CD9-210ENST00000543916 OTUD4Q01804 1114 aaKnown RBP15.28■□□□□ 0.04
CD9-210ENST00000543916 RAD51Q06609 339 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 ZNF33AQ06730 810 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 NSUN2Q08J23 767 aaKnown RBP eCLIP15.28■□□□□ 0.04
CD9-210ENST00000543916 SFSWAPQ12872 951 aaKnown RBP15.28■□□□□ 0.04
CD9-210ENST00000543916 KLF1Q13351 362 aaPredicted RBP15.28■□□□□ 0.04
CD9-210ENST00000543916 ELF2Q15723 593 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 ZNF569Q5MCW4 686 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 PIP5KL1Q5T9C9 394 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 CCDC181Q5TID7 509 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 GDPD4Q6W3E5 623 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 BZW1Q7L1Q6 419 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms