RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ACVRL1P37023 503 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 CDK18Q07002 472 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 LBRQ14739 615 aaKnown RBP17.27■□□□□ 0.36
PTPRO-209ENST00000543886 DLG2Q15700 870 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 TAF12Q16514 161 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 TMCO4Q5TGY1 634 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 SNX30Q5VWJ9 437 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 KIAA0930Q6ICG6 404 aaPredicted RBP17.27■□□□□ 0.36
PTPRO-209ENST00000543886 CFAP52Q8N1V2 620 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 MYEOVQ96EZ4 313 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 TSNARE1Q96NA8 513 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 FAM167BQ9BTA0 163 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 WWP1Q9H0M0 922 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 LRMDAQ9H2I8 198 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 TREX1Q9NSU2 369 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 ZNF358Q9NW07 568 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 MARCOQ9UEW3 520 aaPredicted RBP17.27■□□□□ 0.36
PTPRO-209ENST00000543886 ANKRD6Q9Y2G4 727 aa17.27■□□□□ 0.36
PTPRO-209ENST00000543886 ZNF840PA6NDX5 716 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 C2orf71A6NGG8 1288 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 MGRN1O60291 552 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 PRAMEF11O60813 436 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 SEC24AO95486 1093 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 CBX6O95503 412 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 SOD2P04179 222 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 SAT1P21673 171 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 ARCN1P48444 511 aaKnown RBP17.27■□□□□ 0.35
PTPRO-209ENST00000543886 SLC1A6P48664 564 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 IRF9Q00978 393 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 ZNF235Q14590 738 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 USP10Q14694 798 aaKnown RBP17.27■□□□□ 0.35
PTPRO-209ENST00000543886 SNCBQ16143 134 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 CNGA3Q16281 694 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 RFWD3Q6PCD5 774 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 CLEC14AQ86T13 490 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 PLD6Q8N2A8 252 aaKnown RBP17.27■□□□□ 0.35
PTPRO-209ENST00000543886 PPP4R1Q8TF05 950 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 SREK1Q8WXA9 508 aaKnown RBP17.27■□□□□ 0.35
PTPRO-209ENST00000543886 TMEM237Q96Q45 408 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 CLSTN3Q9BQT9 956 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 TACO1Q9BSH4 297 aaKnown RBP17.27■□□□□ 0.35
PTPRO-209ENST00000543886 C20orf27Q9GZN8 174 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 CYP4F11Q9HBI6 524 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 ATP13A1Q9HD20 1204 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 TRPM5Q9NZQ8 1165 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 ATP11BQ9Y2G3 1177 aa17.27■□□□□ 0.35
PTPRO-209ENST00000543886 CHUKO15111 745 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 COCHO43405 550 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 HNRNPCL1O60812 293 aaKnown RBP17.26■□□□□ 0.35
PTPRO-209ENST00000543886 GJB5O95377 273 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 MMP2P08253 660 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 KRT16P08779 473 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 ARNTP27540 789 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 SLC6A4P31645 630 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 ALDH1A3P47895 512 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 MPP1Q00013 466 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 CTBP1Q13363 440 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 RABGAP1LQ5R372 815 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 KLHDC10Q6PID8 442 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 DENND6AQ8IWF6 608 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 PGBD5Q8N414 524 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 ACVR1CQ8NER5 493 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 ZNF461Q8TAF7 563 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 GABPB2Q8TAK5 448 aaPredicted RBP17.26■□□□□ 0.35
PTPRO-209ENST00000543886 INPP5DQ92835 1189 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 PLD4Q96BZ4 506 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 TMEM169Q96HH4 297 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 ZNF558Q96NG5 402 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 RANBP9Q96S59 729 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 POLR1EQ9GZS1 481 aaKnown RBP17.26■□□□□ 0.35
PTPRO-209ENST00000543886 FBXO6Q9NRD1 293 aaPredicted RBP17.26■□□□□ 0.35
PTPRO-209ENST00000543886 HSFX1Q9UBD0 423 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 UXTQ9UBK9 157 aaPredicted RBP17.26■□□□□ 0.35
PTPRO-209ENST00000543886 STK38LQ9Y2H1 464 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 NUMBLQ9Y6R0 609 aa17.26■□□□□ 0.35
PTPRO-209ENST00000543886 SIN3BO75182 1162 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 AHSGP02765 367 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 RALBP11234 206 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 POLD2P49005 469 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 AQP5P55064 265 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 C5orf22Q49AR2 442 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 TPGS2Q68CL5 300 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 ZNF470Q6ECI4 717 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 DENND1CQ8IV53 801 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 SIKE1Q9BRV8 207 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 TUBB6Q9BUF5 446 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 BEGAINQ9BUH8 593 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 RETREG1Q9H6L5 497 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 NMRAL1Q9HBL8 299 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 TMEM39AQ9NV64 488 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 MID2Q9UJV3 735 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 TBX21Q9UL17 535 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 LYPLA1O75608 230 aaPredicted RBP17.25■□□□□ 0.35
PTPRO-209ENST00000543886 ABLIM3O94929 683 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 APOA4P06727 396 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 T-ENOLP0DO92 83 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 HMGA1P17096 107 aaKnown RBP17.25■□□□□ 0.35
PTPRO-209ENST00000543886 SLC1A2P43004 574 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 VEPH1Q14D04 833 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 CTC1Q2NKJ3 1217 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms