RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 ADCK2Q7Z695 626 aa7.91□□□□□ -1.14
VPS13D-211ENST00000543710 TDRPQ86YL5 185 aa7.91□□□□□ -1.14
VPS13D-211ENST00000543710 RNF135Q8IUD6 432 aa7.91□□□□□ -1.14
VPS13D-211ENST00000543710 NUP93Q8N1F7 819 aa7.91□□□□□ -1.14
VPS13D-211ENST00000543710 CENPSQ8N2Z9 138 aa7.91□□□□□ -1.14
VPS13D-211ENST00000543710 LENG9Q96B70 501 aa7.91□□□□□ -1.14
VPS13D-211ENST00000543710 DPY30Q9C005 99 aa7.91□□□□□ -1.14
VPS13D-211ENST00000543710 MICAL2O94851 1124 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 FGRP09769 529 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 LTA4HP09960 611 aaKnown RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 YBX3P16989 372 aaKnown RBP eCLIP7.9□□□□□ -1.143e-7■□□□□ 9.4
VPS13D-211ENST00000543710 ADSSP30520 456 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 CHKAP35790 457 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 AP3S2P59780 193 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 RBPJQ06330 500 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 PRAMEF19Q5SWL8 479 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 SZRD1Q7Z422 152 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 ZNF605Q86T29 641 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 IFNLR1Q8IU57 520 aaPredicted RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 SVOPLQ8N434 492 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 NATD1Q8N6N6 113 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 FAM98AQ8NCA5 519 aaKnown RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 ENKURQ8TC29 256 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 C8orf33Q9H7E9 229 aaPredicted RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 KCTD5Q9NXV2 234 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 DUSP12Q9UNI6 340 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 RPS6KL1Q9Y6S9 549 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 MGAT4DA6NG13 374 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 ZSCAN5CA6NGD5 496 aaPredicted RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 FZD9O00144 591 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 PLK4O00444 970 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 PMM2O15305 246 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 ZSCAN9O15535 394 aaPredicted RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 SLC37A4O43826 429 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 RHOCP08134 193 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 MYL12AP19105 171 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 CASP1P29466 404 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 IL12RB1P42701 662 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 GPD2P43304 727 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 DCTN2Q13561 401 aaKnown RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 HNRNPDQ14103 355 aaKnown RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 PDK4Q16654 411 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 PTCRAQ6ISU1 281 aaPredicted RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 SLC27A1Q6PCB7 646 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 PLPPR4Q7Z2D5 763 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 ARID3BQ8IVW6 561 aaPredicted RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 PSMA8Q8TAA3 256 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 ZNF75CPQ92670 426 aaPredicted RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 TATDN2Q93075 761 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 TMEM143Q96AN5 459 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 MYLK2Q9H1R3 596 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 EIF2B3Q9NR50 452 aaKnown RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 CLN6Q9NWW5 311 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 FNIP2Q9P278 1114 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 NDOR1Q9UHB4 597 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 TOPAZ1Q8N9V7 1692 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 PLIN4Q96Q06 1357 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 KHNYNO15037 678 aaKnown RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 CHRM3P20309 590 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 CYP3A5P20815 502 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 ACADLP28330 430 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 TOB1P50616 345 aaPredicted RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 PMS1P54277 932 aaKnown RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 GTF2BQ00403 316 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 PTGES3Q15185 160 aaKnown RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 OASLQ15646 514 aaKnown RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 CYP2A13Q16696 494 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 SLC44A2Q8IWA5 706 aaPredicted RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 HAO1Q9UJM8 370 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 VPS4AQ9UN37 437 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 SCAF8Q9UPN6 1271 aaKnown RBP7.9□□□□□ -1.14
VPS13D-211ENST00000543710 SIK3Q9Y2K2 1263 aa7.9□□□□□ -1.14
VPS13D-211ENST00000543710 CYB561D2O14569 222 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 RPL9P32969 192 aaKnown RBP7.9□□□□□ -1.15
VPS13D-211ENST00000543710 CAPZA2P47755 286 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 PTPRNQ16849 979 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 CCDC142Q17RM4 750 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 HLA-DQA1Q5Y7H0 255 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 CCDC36Q8IYA8 594 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 SH2D3CQ8N5H7 860 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 RORBQ92753 470 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 HSFY1Q96LI6 401 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 YTHDF1Q9BYJ9 559 aaKnown RBP7.9□□□□□ -1.15
VPS13D-211ENST00000543710 LRMDAQ9H2I8 198 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 SLC24A3Q9HC58 644 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 MOV10Q9HCE1 1003 aaKnown RBP7.9□□□□□ -1.15
VPS13D-211ENST00000543710 KCNMB3Q9NPA1 279 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 ETNK2Q9NVF9 386 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 UBP1Q9NZI7 540 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 DEC1Q9P2X7 70 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 LGALS13Q9UHV8 139 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 VAV3Q9UKW4 847 aa7.9□□□□□ -1.15
VPS13D-211ENST00000543710 MYL12BO14950 172 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 CHST10O43529 356 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 NDUFB5O43674 189 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 SEC24DO94855 1032 aaPredicted RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ASS1P00966 412 aaKnown RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 MZF1P28698 734 aaPredicted RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 PTPN7P35236 360 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 GUCA1AP43080 201 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms