RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	ENPP2	Q13822	863 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	PRPSAP1	Q14558	356 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	ELAVL3	Q14576	367 aa	Known RBP	10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	OASL	Q15646	514 aa	Known RBP	10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	CRY1	Q16526	586 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	POM121L1P	Q3SYA9	428 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	ARSI	Q5FYB1	569 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	ANKRD20A2	Q5SQ80	823 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	CFAP58	Q5T655	872 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	ANKRD20A1	Q5TYW2	823 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	ANKRD20A3	Q5VUR7	823 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	DRICH1	Q6PGQ1	229 aa	Predicted RBP	10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	KIAA1324	Q6UXG2	1013 aa	Known RBP	10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	TMEM92	Q6UXU6	159 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	CACUL1	Q86Y37	369 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	TMPRSS6	Q8IU80	811 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	MMAA	Q8IVH4	418 aa	Known RBP	10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	PLPP6	Q8IY26	295 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	ZNF567	Q8N184	647 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	PGBD5	Q8N414	524 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	FBXL6	Q8N531	539 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	TAB3	Q8N5C8	712 aa	Predicted RBP	10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	CNTD1	Q8N815	330 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	CHST14	Q8NCH0	376 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	MNS1	Q8NEH6	495 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	CCDC110	Q8TBZ0	833 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	GRIN3A	Q8TCU5	1115 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	GRK7	Q8WTQ7	553 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	HMGB4	Q8WW32	186 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	TEKT5	Q96M29	485 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	SPATA13	Q96N96	652 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	HHIP	Q96QV1	700 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	IER2	Q9BTL4	223 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	DDX47	Q9H0S4	455 aa	Known RBP	10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	USP29	Q9HBJ7	922 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	GLOD4	Q9HC38	313 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	IL36A	Q9UHA7	158 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545	AMACR	Q9UHK6	382 aa		10.3	□□□□□ -0.76
CPSF7-221	ENST00000543545		A0A1W2PQF6	199 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	C5orf60	A6NFR6	353 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	C1QTNF3-AMACR	E9PGA6	284 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	CCDC188	H7C350	402 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	KPNA3	O00505	521 aa	Predicted RBP	10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	INSIG1	O15503	277 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	LAMTOR5	O43504	91 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	OPHN1	O60890	802 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	GAS8	O95995	478 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	PRNP	P04156	253 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	CHRM1	P11229	460 aa	Predicted RBP	10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	ACADM	P11310	421 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	ETS1	P14921	441 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	COL9A1	P20849	921 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	CD86	P42081	329 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	MAPK8	P45983	427 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	RGR	P47804	291 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	PSMD8	P48556	350 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	CSNK1D	P48730	415 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	FNTA	P49354	379 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	CCR3	P51677	355 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	GDF10	P55107	478 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	AP1S1	P61966	158 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	SATB1	Q01826	763 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	BCL2L1	Q07817	233 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	C2orf54	Q08AI8	447 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	CAMK2G	Q13555	558 aa	Predicted RBP	10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	PPP1R7	Q15435	360 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	TRIP13	Q15645	432 aa	Predicted RBP	10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	CYP1B1	Q16678	543 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	FAM46C	Q5VWP2	391 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	ZNF776	Q68DI1	518 aa	Predicted RBP	10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	ANO7	Q6IWH7	933 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	TTC27	Q6P3X3	843 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	BMP8A	Q7Z5Y6	402 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	PRUNE1	Q86TP1	453 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	TMEM105	Q8N8V8	129 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	C12orf50	Q8NA57	414 aa	Predicted RBP	10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	SPATA4	Q8NEY3	305 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	PRCC	Q92733	491 aa	Predicted RBP	10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	SIPA1	Q96FS4	1042 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	RUNDC3B	Q96NL0	473 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	NUDCD1	Q96RS6	583 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	KRT12	Q99456	494 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	MGME1	Q9BQP7	344 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	SLC25A51	Q9H1U9	297 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	ATP13A3	Q9H7F0	1226 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	FBRS	Q9HAH7	460 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	NOD2	Q9HC29	1040 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	DYRK4	Q9NR20	520 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	C2orf42	Q9NWW7	574 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	ATP8A1	Q9Y2Q0	1164 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	MRFAP1	Q9Y605	127 aa		10.29	□□□□□ -0.76
CPSF7-221	ENST00000543545	COL4A3	Q01955	1670 aa		10.28	□□□□□ -0.76
CPSF7-221	ENST00000543545	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.28	□□□□□ -0.76
CPSF7-221	ENST00000543545	CTAGE15	A4D2H0	777 aa		10.28	□□□□□ -0.76
CPSF7-221	ENST00000543545		E7EVH7	732 aa		10.28	□□□□□ -0.76
CPSF7-221	ENST00000543545	ALOX15B	O15296	676 aa		10.28	□□□□□ -0.76
CPSF7-221	ENST00000543545	GCAT	O75600	419 aa		10.28	□□□□□ -0.76
CPSF7-221	ENST00000543545	LEFTY1	O75610	366 aa		10.28	□□□□□ -0.76
CPSF7-221	ENST00000543545	GJB3	O75712	270 aa		10.28	□□□□□ -0.76
CPSF7-221	ENST00000543545	PIGN	O95427	931 aa		10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms