RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 SNX32Q86XE0 403 aa13.66□□□□□ -0.22
PPME1-208ENST00000543525 ARHGAP12Q8IWW6 846 aa13.66□□□□□ -0.22
PPME1-208ENST00000543525 FSTL5Q8N475 847 aaPredicted RBP13.66□□□□□ -0.22
PPME1-208ENST00000543525 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.66□□□□□ -0.22
PPME1-208ENST00000543525 IFT43Q96FT9 208 aa13.66□□□□□ -0.22
PPME1-208ENST00000543525 STK39Q9UEW8 545 aa13.66□□□□□ -0.22
PPME1-208ENST00000543525 ADAMTS6Q9UKP5 1117 aa13.66□□□□□ -0.22
PPME1-208ENST00000543525 TCAF1Q9Y4C2 921 aa13.66□□□□□ -0.22
PPME1-208ENST00000543525 TRPM7Q96QT4 1865 aa13.66□□□□□ -0.22
PPME1-208ENST00000543525 CASQ2O14958 399 aaPredicted RBP13.65□□□□□ -0.22
PPME1-208ENST00000543525 IRAK2O43187 625 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 PEX1O43933 1283 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 DLX3O60479 287 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 NPHS1O60500 1241 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 CELF2O95319 508 aaKnown RBP13.65□□□□□ -0.22
PPME1-208ENST00000543525 CYP11A1P05108 521 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 FESP07332 822 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 PAX3P23760 479 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 GABRB3P28472 473 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 HOXC13P31276 330 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 NUDT2P50583 147 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 AFF1P51825 1210 aaKnown RBP13.65□□□□□ -0.22
PPME1-208ENST00000543525 MPP1Q00013 466 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 ITGA7Q13683 1181 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 MAPRE1Q15691 268 aaKnown RBP13.65□□□□□ -0.22
PPME1-208ENST00000543525 CCL14Q16627 93 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 BTBD8Q5XKL5 378 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 AGMOQ6ZNB7 445 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 KBTBD6Q86V97 674 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 CENPLQ8N0S6 344 aaPredicted RBP13.65□□□□□ -0.22
PPME1-208ENST00000543525 EFCAB3Q8N7B9 438 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 HIPK4Q8NE63 616 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 SLC39A8Q9C0K1 460 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 EBF3Q9H4W6 596 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 ABCC13Q9NSE7 274 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 ZDHHC2Q9UIJ5 367 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 VPS28Q9UK41 221 aa13.65□□□□□ -0.22
PPME1-208ENST00000543525 COL4A4P53420 1690 aaPredicted RBP13.65□□□□□ -0.22
PPME1-208ENST00000543525 SHROOM3Q8TF72 1996 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 CASP8AP2Q9UKL3 1982 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 TARM1B6A8C7 271 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 GPR182O15218 404 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 MAFKO60675 156 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 PAGE1O75459 146 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 MT-CYBP00156 380 aaPredicted RBP13.64□□□□□ -0.23
PPME1-208ENST00000543525 UQCRBP14927 111 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 EPHA3P29320 983 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 CCR1P32246 355 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 ADRA1AP35348 466 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 ARCN1P48444 511 aaKnown RBP13.64□□□□□ -0.23
PPME1-208ENST00000543525 CD151P48509 253 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 SLC12A2P55011 1212 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 CTBP1Q13363 440 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 TRIP10Q15642 601 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 RNF220Q5VTB9 566 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 ARMC3Q5W041 872 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 LPCAT4Q643R3 524 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 NXNQ6DKJ4 435 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 DENND5AQ6IQ26 1287 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 ESRP1Q6NXG1 681 aaKnown RBP13.64□□□□□ -0.23
PPME1-208ENST00000543525 BNC2Q6ZN30 1099 aaPredicted RBP13.64□□□□□ -0.23
PPME1-208ENST00000543525 RNF111Q6ZNA4 994 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 LRRC49Q8IUZ0 686 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 DENND6AQ8IWF6 608 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 DSELQ8IZU8 1212 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 THEM5Q8N1Q8 247 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 C2orf69Q8N8R5 385 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 GABPB2Q8TAK5 448 aaPredicted RBP13.64□□□□□ -0.23
PPME1-208ENST00000543525 NXNL1Q96CM4 212 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 ELMO2Q96JJ3 720 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 MRPL57Q9BQC6 102 aaKnown RBP13.64□□□□□ -0.23
PPME1-208ENST00000543525 NUF2Q9BZD4 464 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 PRKD2Q9BZL6 878 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 MRPL46Q9H2W6 279 aaKnown RBP13.64□□□□□ -0.23
PPME1-208ENST00000543525 ZNF385DQ9H6B1 395 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 TBC1D13Q9NVG8 400 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 XPR1Q9UBH6 696 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 NEU3Q9UQ49 428 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 PDE4DIPQ5VU43 2346 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 TRPC5OSA6NMA1 111 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 PGK1P00558 417 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 RGS2P41220 211 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 CCR10P46092 362 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 DNAJB13P59910 316 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 POU4F1Q01851 419 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 MED21Q13503 144 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 EIF4EBP2Q13542 120 aaPredicted RBP13.64□□□□□ -0.23
PPME1-208ENST00000543525 SFT2D3Q587I9 215 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 MANEALQ5VSG8 457 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 KIAA0930Q6ICG6 404 aaPredicted RBP13.64□□□□□ -0.23
PPME1-208ENST00000543525 SDCCAG8Q86SQ7 713 aaPredicted RBP13.64□□□□□ -0.23
PPME1-208ENST00000543525 LSMEM2Q8N112 164 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 CCNYL1Q8N7R7 359 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 C2CD4AQ8NCU7 369 aaPredicted RBP13.64□□□□□ -0.23
PPME1-208ENST00000543525 PPP1R36Q96LQ0 422 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 GPR78Q96P69 363 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 PAAF1Q9BRP4 392 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 MTG1Q9BT17 334 aaPredicted RBP13.64□□□□□ -0.23
PPME1-208ENST00000543525 FSD1LQ9BXM9 530 aa13.64□□□□□ -0.23
PPME1-208ENST00000543525 SENP6Q9GZR1 1112 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms