RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 HSPA1AP0DMV8 641 aaKnown RBP13.08□□□□□ -0.32
DDX11-223ENST00000542838 HSPA1BP0DMV9 641 aaKnown RBP13.08□□□□□ -0.32
DDX11-223ENST00000542838 ZNF23P17027 643 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 HOXA11P31270 313 aaPredicted RBP13.08□□□□□ -0.32
DDX11-223ENST00000542838 ADARP55265 1226 aaKnown RBP13.08□□□□□ -0.32
DDX11-223ENST00000542838 RAB10P61026 200 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 MPP1Q00013 466 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 DCTN2Q13561 401 aaKnown RBP13.08□□□□□ -0.32
DDX11-223ENST00000542838 LAMC2Q13753 1193 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 PRPSAP1Q14558 356 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 NAPEPLDQ6IQ20 393 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 KRT80Q6KB66 452 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 DLK2Q6UY11 383 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 CEP97Q8IW35 865 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 DENND6AQ8IWF6 608 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 MYO1HQ8N1T3 1032 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 B3GALNT2Q8NCR0 500 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 TMIGD2Q96BF3 282 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 HDAC11Q96DB2 347 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 ZNF512Q96ME7 567 aaPredicted RBP13.08□□□□□ -0.32
DDX11-223ENST00000542838 PHF12Q96QT6 1004 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 OSBPL11Q9BXB4 747 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 NCKIPSDQ9NZQ3 722 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 FAM95CA0A1B0GW59 222 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 H0YJX3 145 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 PIRO00625 290 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 HNRNPLP14866 589 aaKnown RBP eCLIP13.08□□□□□ -0.32
DDX11-223ENST00000542838 STMN1P16949 149 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 RHDQ02161 417 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 RALGDSQ12967 914 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 STX5Q13190 355 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 EML3Q32P44 896 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 CNSTQ6PJW8 725 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 HERC6Q8IVU3 1022 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 SULF1Q8IWU6 871 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 USP33Q8TEY7 942 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 IRGQQ8WZA9 623 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 SLC2A13Q96QE2 648 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 KIFC1Q9BW19 673 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 UNC93B1Q9H1C4 597 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 NXF3Q9H4D5 531 aaKnown RBP13.08□□□□□ -0.32
DDX11-223ENST00000542838 POMKQ9H5K3 350 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 DNAAF2Q9NVR5 837 aaKnown RBP13.08□□□□□ -0.32
DDX11-223ENST00000542838 KLK14Q9P0G3 267 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 SBF1O95248 1867 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 COL1A2P08123 1366 aa13.08□□□□□ -0.32
DDX11-223ENST00000542838 POLR2AP24928 1970 aaKnown RBP13.08□□□□□ -0.32
DDX11-223ENST00000542838 HEATR9A2RTY3 570 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 I6L893 689 aaPredicted RBP13.07□□□□□ -0.32
DDX11-223ENST00000542838 H6PDO95479 791 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 NPR3P17342 541 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 HDCP19113 662 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 UGP2Q16851 508 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 AGKQ53H12 422 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 MTX3Q5HYI7 312 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 REP15Q6BDI9 236 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 CYP2R1Q6VVX0 501 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 OTOP3Q7RTS5 596 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 OSTM1Q86WC4 334 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 PELI3Q8N2H9 469 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 TXNDC5Q8NBS9 432 aaKnown RBP13.07□□□□□ -0.32
DDX11-223ENST00000542838 TEKT5Q96M29 485 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 ZNF560Q96MR9 790 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 GPR78Q96P69 363 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 HNRNPABQ99729 332 aaKnown RBP13.07□□□□□ -0.32
DDX11-223ENST00000542838 SLC29A1Q99808 456 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 BRD8Q9H0E9 1235 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 MRPL46Q9H2W6 279 aaKnown RBP13.07□□□□□ -0.32
DDX11-223ENST00000542838 GOLGA2P5Q9HBQ8 144 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 GMEB1Q9Y692 573 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 HUS1O60921 280 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 ARSAP15289 507 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 GALK1P51570 392 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 TKTL1P51854 596 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 RABGGTBP53611 331 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 SEMA3BQ13214 749 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 MAPRE2Q15555 327 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 TRIM67Q6ZTA4 783 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 LPCAT2Q7L5N7 544 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 CARM1Q86X55 608 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 GRIN3AQ8TCU5 1115 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 LZICQ8WZA0 190 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 ITFG2Q969R8 447 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 ELMO2Q96JJ3 720 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 SLC9A7Q96T83 725 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 VAT1Q99536 393 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 CIB1Q99828 191 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 MED10Q9BTT4 135 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 FTHL17Q9BXU8 183 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 WDR6Q9NNW5 1121 aaKnown RBP13.07□□□□□ -0.32
DDX11-223ENST00000542838 CCDC167Q9P0B6 97 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 RBPJLQ9UBG7 517 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 MYRFQ9Y2G1 1151 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 SNX10Q9Y5X0 201 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 CSADQ9Y600 493 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 NEMP2A6NFY4 417 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 FZD9O00144 591 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 NRP1O14786 923 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 IRF6O14896 467 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 CD4P01730 458 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms