RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 EDC4Q6P2E9 1401 aaKnown RBP4.4□□□□□ -1.7
SNHG1-219ENST00000542112 PNMA6EA0A0J9YXQ4 647 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 LOC390937A0A1W2PQ73 354 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 A0A1W2PQU0 124 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SSU72P8A0A1W2PR75 194 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 A0A1W2PRG6 482 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ARHGEF37A1IGU5 675 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SAGE2PA6NJ88 616 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 C2orf74A8MZ97 194 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 CLDN25C9JDP6 229 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 H7C1D1 291 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 CCRL2O00421 344 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 PLK4O00444 970 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 NOP56O00567 594 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SH2B2O14492 632 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 UGT1A9O60656 530 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 PALMO75781 387 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 TM7SF2O76062 418 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 PGM3O95394 542 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 CYP3A4P08684 503 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 UGT1A6P19224 532 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 RAB4AP20338 218 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 CD247P20963 164 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 UGT1A1P22309 533 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 UGT1A4P22310 534 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 CHMP24386 653 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 PON1P27169 355 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 DCKP27707 260 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 PCSK6P29122 969 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 UGT1A3P35503 534 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 UGT1A5P35504 534 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SOX6P35712 828 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 UGT2B10P36537 528 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SERPINB5P36952 375 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 GARSP41250 739 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 KIR3DL1P43629 444 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 YAP1P46937 504 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 NPTX2P47972 431 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 NPY2RP49146 381 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 DNM2P50570 870 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 NEK3P51956 506 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 MAPK12P53778 367 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 AIF1P55008 147 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 TMBIM6P55061 237 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 NCKAP1LP55160 1127 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 TPTEP56180 551 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 HAND2P61296 217 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 CSNK2BP67870 215 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 OTUD4Q01804 1114 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ACY1Q03154 408 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 CDK5R2Q13319 367 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SNAPC2Q13487 334 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 MORF4L2Q15014 288 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 TTF1Q15361 905 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 TOMM20Q15388 145 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 NAB2Q15742 525 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 CYP27C1Q4G0S4 372 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 PITRM1Q5JRX3 1037 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 RARS2Q5T160 578 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 HES5Q5TA89 166 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 OGFRL1Q5TC84 451 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 GARNL3Q5VVW2 1013 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 DCAF15Q66K64 600 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ATG16L1Q676U5 607 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SULT1C3Q6IMI6 304 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 STYK1Q6J9G0 422 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SWSAP1Q6NVH7 229 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ZFP1Q6P2D0 407 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 POMZP3Q6PJE2 187 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 GADL1Q6ZQY3 521 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ADAT2Q7Z6V5 191 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 RALGPS2Q86X27 583 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 MIB1Q86YT6 1006 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 RASGRP3Q8IV61 690 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 CTAGE3PQ8IX95 158 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 CCDC36Q8IYA8 594 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SYTL1Q8IYJ3 562 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ADGRG5Q8IZF4 528 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SRBD1Q8N5C6 995 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 METTL25Q8N6Q8 603 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 BVESQ8NE79 360 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 BEST2Q8NFU1 509 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 TSPAN14Q8NG11 270 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 VANGL1Q8TAA9 524 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 DEPDC1BQ8WUY9 529 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 KCTD4Q8WVF5 259 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 JPH3Q8WXH2 748 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 CELF1Q92879 486 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ATP2A3Q93084 1043 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ATP6V1E2Q96A05 226 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 TP53INP1Q96A56 240 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ZDHHC12Q96GR4 267 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 RCC1LQ96I51 464 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 WNK4Q96J92 1243 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 MAP6Q96JE9 813 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ZC3H10Q96K80 434 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 C7orf34Q96L11 122 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 RIPOR3Q96MK2 946 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SLC29A1Q99808 456 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 DUSP23Q9BVJ7 150 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms