RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 PIEZO2Q9H5I5 2752 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 PYCARD-AS1I3L0S3 204 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 GCATO75600 419 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 DXOO77932 396 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 FGFR1OPO95684 399 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 CELA2BP08218 269 aaPredicted RBP15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 MTIF2P46199 727 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 PDX1P52945 283 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 RPS21P63220 83 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 MTA1Q13330 715 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 PDE1CQ14123 709 aaPredicted RBP15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 ISXQ2M1V0 245 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 C15orf59Q2T9L4 293 aaPredicted RBP15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 CARD16Q5EG05 197 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 C3orf38Q5JPI3 329 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 ARHGAP40Q5TG30 622 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 MANEALQ5VSG8 457 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 KIAA1161Q6NSJ0 714 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 LRRC31Q6UY01 552 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 EFL1Q7Z2Z2 1120 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 PARGQ86W56 976 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 ZDHHC17Q8IUH5 632 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 PCDH20Q8N6Y1 951 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 MAPK15Q8TD08 544 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 CPA5Q8WXQ8 436 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 C18orf8Q96DM3 657 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 ATXN7L3BQ96GX2 97 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 PRR11Q96HE9 360 aaPredicted RBP15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 VCPIP1Q96JH7 1222 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 ZNF578Q96N58 590 aaPredicted RBP15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 ZYG11BQ9C0D3 744 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 POLR1BQ9H9Y6 1135 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 ENTPD2Q9Y5L3 495 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 LRP4O75096 1905 aa15.74■□□□□ 0.11
CLSTN3-213ENST00000541953 CPED1A4D0V7 1026 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 C16orf96A6NNT2 1141 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 LZTS3O60299 673 aaPredicted RBP15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 GP1BAP07359 652 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 MMEP08473 750 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 ALPPL2P10696 532 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 IGFALSP35858 605 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 RECQLP46063 649 aaPredicted RBP15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 LSSP48449 732 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 PFN3P60673 137 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 HNRNPKP61978 463 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 NOMO3P69849 1222 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 ATP11AP98196 1134 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 CFHR1Q03591 330 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 C1orf61Q13536 156 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 RAPGEF1Q13905 1077 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 MAN2A1Q16706 1144 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 ATXN7L2Q5T6C5 722 aaPredicted RBP15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 NLRP14Q86W24 1093 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 TMEM35BQ8NCS4 154 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 SLC20A1Q8WUM9 679 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 IFT43Q96FT9 208 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 PPP1R16AQ96I34 528 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 C1QTNF2Q9BXJ5 285 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 NAA15Q9BXJ9 866 aaKnown RBP15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 CEP44Q9C0F1 390 aa15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 METTL5Q9NRN9 209 aaKnown RBP15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 HECAQ9UBI9 543 aaPredicted RBP15.73■□□□□ 0.11
CLSTN3-213ENST00000541953 CYSRT1A8MQ03 144 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 AQP9O43315 295 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 AP1G1O43747 822 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 UGT2B4P06133 528 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 JUNDP17535 347 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 SCNN1AP37088 669 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 LY6DQ14210 128 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 TCEA2Q15560 299 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 CDO1Q16878 200 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 HS1BP3Q53T59 392 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 NAA35Q5VZE5 725 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 RETSATQ6NUM9 610 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 ZCCHC8Q6NZY4 707 aaKnown RBP15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 ZNF783Q6ZMS7 281 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 SLC35F3Q8IY50 421 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 JOSD2Q8TAC2 188 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 LMX1AQ8TE12 382 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 KCNE4Q8WWG9 221 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 FEM1CQ96JP0 617 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 HAPLN3Q96S86 360 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 LRRC61Q9BV99 259 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 CLPBQ9H078 707 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 MBNL1Q9NR56 388 aaKnown RBP15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 DNAI1Q9UI46 699 aa15.72■□□□□ 0.11
CLSTN3-213ENST00000541953 COL6A6A6NMZ7 2263 aa15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 KLK10O43240 276 aa15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 F9P00740 461 aa15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 RABIFP47224 123 aa15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 SKOR1P84550 965 aa15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 DPCR1Q3MIW9 517 aa15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 VWA3BQ502W6 1294 aa15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 KLHDC7AQ5VTJ3 777 aa15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 KCTD16Q68DU8 428 aa15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 RYBPQ8N488 228 aaPredicted RBP15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 CCDC185Q8N715 623 aa15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 LSM14AQ8ND56 463 aaKnown RBP15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 EPS8L1Q8TE68 723 aa15.71■□□□□ 0.11
CLSTN3-213ENST00000541953 TTC9Q92623 222 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms