RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 PARD3BQ8TEW8 1205 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 TMEM174Q8WUU8 243 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 SMG7Q92540 1137 aaKnown RBP6.74□□□□□ -1.33
TTR-203ENST00000541025 SMARCE1Q969G3 411 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 CCDC47Q96A33 483 aaKnown RBP6.74□□□□□ -1.33
TTR-203ENST00000541025 ZG16BQ96DA0 208 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 RPGRIP1Q96KN7 1286 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 PGLYRP2Q96PD5 576 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 GSDMAQ96QA5 445 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 PHF7Q9BWX1 381 aaPredicted RBP6.74□□□□□ -1.33
TTR-203ENST00000541025 PLEKHA4Q9H4M7 779 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 KIAA1586Q9HCI6 787 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 HCFC1R1Q9NWW0 138 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 CGNQ9P2M7 1197 aaKnown RBP6.74□□□□□ -1.33
TTR-203ENST00000541025 ITGA11Q9UKX5 1188 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 TRAF3IP3Q9Y228 551 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 FAM50BQ9Y247 325 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 NME7Q9Y5B8 376 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 WDFY4Q6ZS81 3184 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 CUL9Q8IWT3 2517 aa6.74□□□□□ -1.33
TTR-203ENST00000541025 TTC28Q96AY4 2481 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 C2CD4DB7Z1M9 353 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 H7C4K7 107 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 CCL16O15467 120 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 CALUO43852 315 aaPredicted RBP6.73□□□□□ -1.33
TTR-203ENST00000541025 KINO60870 393 aaKnown RBP6.73□□□□□ -1.33
TTR-203ENST00000541025 ULK1O75385 1050 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 SOAT2O75908 522 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 TNNC2P02585 160 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 CLEC2LP0C7M8 214 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 TRIM49P0CI25 452 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 TRIM49CP0CI26 452 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 TNNI1P19237 187 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 NR2F2P24468 414 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 ACAT1P24752 427 aaKnown RBP6.73□□□□□ -1.33
TTR-203ENST00000541025 MTHFRP42898 656 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 SESN3P58005 492 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 RBP5P82980 135 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 DUSP2Q05923 314 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 BFSP1Q12934 665 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 CAMK4Q16566 473 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 NFIL3Q16649 462 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 SOWAHAQ2M3V2 549 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 FAM214AQ32MH5 1076 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 COBLL1Q53SF7 1204 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 PPM1LQ5SGD2 360 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 ATAT1Q5SQI0 421 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 ANKRD40Q6AI12 368 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 CENPPQ6IPU0 288 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 CLEC17AQ6ZS10 378 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 DOK3Q7L591 496 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 GRASPQ7Z6J2 395 aaPredicted RBP6.73□□□□□ -1.33
TTR-203ENST00000541025 SPATS2Q86XZ4 545 aaKnown RBP6.73□□□□□ -1.33
TTR-203ENST00000541025 ADSSL1Q8N142 457 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 PDCL2Q8N4E4 241 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 LRRC52Q8N7C0 313 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 OR52N2Q8NGI0 321 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 GOLGA5Q8TBA6 731 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 CPT1CQ8TCG5 803 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 HDAC7Q8WUI4 952 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 ANKRD36BP1Q96IX9 119 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 RIPOR3Q96MK2 946 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 ZNF560Q96MR9 790 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 NECTIN4Q96NY8 510 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 FNBP1Q96RU3 617 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 ZCWPW1Q9H0M4 648 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 SMOC2Q9H3U7 446 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 EPHX3Q9H6B9 360 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 CYP4F11Q9HBI6 524 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 WDR6Q9NNW5 1121 aaKnown RBP6.73□□□□□ -1.33
TTR-203ENST00000541025 LMBRD1Q9NUN5 540 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 TMLHEQ9NVH6 421 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 RMND1Q9NWS8 449 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 ZDHHC7Q9NXF8 308 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 GDAP2Q9NXN4 497 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 MUTYHQ9UIF7 546 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 TMPRSS11EQ9UL52 423 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 L1RE1Q9UN81 338 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 SPEF1Q9Y4P9 236 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 SNX9Q9Y5X1 595 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 MIA3Q5JRA6 1907 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 CLUHO75153 1309 aa6.73□□□□□ -1.33
TTR-203ENST00000541025 ARHGEF37A1IGU5 675 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 MTMR11A4FU01 709 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 OR6C75A6NL08 312 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 K7ESF4 209 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 SMC2O95347 1197 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 VNN1O95497 513 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 GYPEP15421 78 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 HOXA9P31269 272 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 PNPLA4P41247 253 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 EPHB1P54762 984 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 MANFP55145 182 aaKnown RBP6.72□□□□□ -1.33
TTR-203ENST00000541025 MYL6P60660 151 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 MGAT5Q09328 741 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 TWF1Q12792 350 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 GPR17Q13304 367 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 MORC3Q14149 939 aa6.72□□□□□ -1.33
TTR-203ENST00000541025 MYBPC2Q14324 1141 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms