RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 PTK2Q05397 1052 aa27.31■■□□□ 1.96
CHFR-218ENST00000540963 PDE1CQ14123 709 aaPredicted RBP27.31■■□□□ 1.96
CHFR-218ENST00000540963 PASD1Q8IV76 773 aa27.31■■□□□ 1.96
CHFR-218ENST00000540963 WDR36Q8NI36 951 aaKnown RBP27.31■■□□□ 1.96
CHFR-218ENST00000540963 ANLNQ9NQW6 1124 aa27.31■■□□□ 1.96
CHFR-218ENST00000540963 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.31■■□□□ 1.96
CHFR-218ENST00000540963 SPASTQ9UBP0 616 aa27.31■■□□□ 1.96
CHFR-218ENST00000540963 KLF15Q9UIH9 416 aa27.31■■□□□ 1.96
CHFR-218ENST00000540963 CTNND2Q9UQB3 1225 aa27.31■■□□□ 1.96
CHFR-218ENST00000540963 I6L893 689 aaPredicted RBP27.3■■□□□ 1.96
CHFR-218ENST00000540963 ZMPSTE24O75844 475 aa27.3■■□□□ 1.96
CHFR-218ENST00000540963 PFN3P60673 137 aa27.3■■□□□ 1.96
CHFR-218ENST00000540963 BECN1Q14457 450 aa27.3■■□□□ 1.96
CHFR-218ENST00000540963 CARD16Q5EG05 197 aa27.3■■□□□ 1.96
CHFR-218ENST00000540963 SYNCQ9H7C4 482 aa27.3■■□□□ 1.96
CHFR-218ENST00000540963 SCNN1AP37088 669 aa27.29■■□□□ 1.96
CHFR-218ENST00000540963 PAK1Q13153 545 aa27.29■■□□□ 1.96
CHFR-218ENST00000540963 MORC3Q14149 939 aa27.29■■□□□ 1.96
CHFR-218ENST00000540963 PTK2BQ14289 1009 aa27.29■■□□□ 1.96
CHFR-218ENST00000540963 ARHGAP44Q17R89 818 aa27.29■■□□□ 1.96
CHFR-218ENST00000540963 DEFB133Q30KQ1 61 aa27.29■■□□□ 1.96
CHFR-218ENST00000540963 PTPN20Q4JDL3 420 aa27.29■■□□□ 1.96
CHFR-218ENST00000540963 CCDC81Q6ZN84 652 aa27.29■■□□□ 1.96
CHFR-218ENST00000540963 TFAP2DQ7Z6R9 452 aa27.29■■□□□ 1.96
CHFR-218ENST00000540963 LMX1AQ8TE12 382 aa27.29■■□□□ 1.96
CHFR-218ENST00000540963 ISG20Q96AZ6 181 aaKnown RBP27.29■■□□□ 1.96
CHFR-218ENST00000540963 MPP6Q9NZW5 540 aa27.29■■□□□ 1.96
CHFR-218ENST00000540963 PIEZO2Q9H5I5 2752 aa27.28■■□□□ 1.96
CHFR-218ENST00000540963 KRT9P35527 623 aa27.28■■□□□ 1.96
CHFR-218ENST00000540963 CCNHP51946 323 aaPredicted RBP27.28■■□□□ 1.96
CHFR-218ENST00000540963 KCNC4Q03721 635 aa27.28■■□□□ 1.96
CHFR-218ENST00000540963 DEUP1Q05D60 604 aa27.28■■□□□ 1.96
CHFR-218ENST00000540963 GJB7Q6PEY0 223 aa27.28■■□□□ 1.96
CHFR-218ENST00000540963 PARS2Q7L3T8 475 aaKnown RBP27.28■■□□□ 1.96
CHFR-218ENST00000540963 OR7D4Q8NG98 312 aa27.28■■□□□ 1.96
CHFR-218ENST00000540963 HAPLN3Q96S86 360 aa27.28■■□□□ 1.96
CHFR-218ENST00000540963 ZNF212Q9UDV6 495 aa27.28■■□□□ 1.96
CHFR-218ENST00000540963 CHD5Q8TDI0 1954 aa27.28■■□□□ 1.96
CHFR-218ENST00000540963 CCDC187A0A096LP49 1063 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 GTPBP10A4D1E9 387 aaKnown RBP27.27■■□□□ 1.96
CHFR-218ENST00000540963 LMO7DNF2Z398 122 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 TOR1BO14657 336 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 SPINT1O43278 529 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 ITGA2BP08514 1039 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 SULT1E1P49888 294 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 EIF2B5Q13144 721 aaKnown RBP27.27■■□□□ 1.96
CHFR-218ENST00000540963 SLC25A52Q3SY17 297 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 C6orf132Q5T0Z8 1188 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 XKR5Q6UX68 686 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 GBP6Q6ZN66 633 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 ARHGEF26Q96DR7 871 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 CRACR2AQ9BSW2 395 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 SPON2Q9BUD6 331 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 ATP13A1Q9HD20 1204 aa27.27■■□□□ 1.96
CHFR-218ENST00000540963 IGLON5A6NGN9 336 aa27.26■■□□□ 1.95
CHFR-218ENST00000540963 ENDOD1O94919 500 aa27.26■■□□□ 1.95
CHFR-218ENST00000540963 TFE3P19532 575 aaPredicted RBP27.26■■□□□ 1.95
CHFR-218ENST00000540963 SLC9A1P19634 815 aa27.26■■□□□ 1.95
CHFR-218ENST00000540963 YPEL5P62699 121 aa27.26■■□□□ 1.95
CHFR-218ENST00000540963 ARF5P84085 180 aa27.26■■□□□ 1.95
CHFR-218ENST00000540963 CLN3Q13286 438 aa27.26■■□□□ 1.95
CHFR-218ENST00000540963 ARL13BQ3SXY8 428 aa27.26■■□□□ 1.95
CHFR-218ENST00000540963 ARTNQ5T4W7 220 aa27.26■■□□□ 1.95
CHFR-218ENST00000540963 APOBEC3BQ9UH17 382 aaKnown RBP27.26■■□□□ 1.95
CHFR-218ENST00000540963 MUSKO15146 869 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 GADD45BO75293 160 aaPredicted RBP27.25■■□□□ 1.95
CHFR-218ENST00000540963 TNFSF15O95150 251 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 ETFBP38117 255 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 THOP1P52888 689 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 STX17P56962 302 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 GNA12Q03113 381 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 ZNF805Q5CZA5 627 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 PERM1Q5SV97 790 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 TPRG1LQ5T0D9 272 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 SLC35F3Q8IY50 421 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 LIN37Q96GY3 246 aaPredicted RBP27.25■■□□□ 1.95
CHFR-218ENST00000540963 CCNL2Q96S94 520 aaPredicted RBP27.25■■□□□ 1.95
CHFR-218ENST00000540963 ZYG11BQ9C0D3 744 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 RETREG1Q9H6L5 497 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 PPARGC1AQ9UBK2 798 aaKnown RBP27.25■■□□□ 1.95
CHFR-218ENST00000540963 ATXN7L1Q9ULK2 861 aaPredicted RBP27.25■■□□□ 1.95
CHFR-218ENST00000540963 SNX10Q9Y5X0 201 aa27.25■■□□□ 1.95
CHFR-218ENST00000540963 WISP1O95388 367 aa27.24■■□□□ 1.95
CHFR-218ENST00000540963 GABRB2P47870 512 aa27.24■■□□□ 1.95
CHFR-218ENST00000540963 DNA2P51530 1060 aa27.24■■□□□ 1.95
CHFR-218ENST00000540963 GEMIN4P57678 1058 aaKnown RBP27.24■■□□□ 1.95
CHFR-218ENST00000540963 EIF3IQ13347 325 aaKnown RBP27.24■■□□□ 1.95
CHFR-218ENST00000540963 SPIDRQ14159 915 aa27.24■■□□□ 1.95
CHFR-218ENST00000540963 EXOC3L4Q17RC7 722 aa27.24■■□□□ 1.95
CHFR-218ENST00000540963 KIAA1614Q5VZ46 1190 aa27.24■■□□□ 1.95
CHFR-218ENST00000540963 PHACTR4Q8IZ21 702 aa27.24■■□□□ 1.95
CHFR-218ENST00000540963 CENPTQ96BT3 561 aa27.24■■□□□ 1.95
CHFR-218ENST00000540963 TBCBQ99426 244 aa27.24■■□□□ 1.95
CHFR-218ENST00000540963 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.24■■□□□ 1.95
CHFR-218ENST00000540963 HECAQ9UBI9 543 aaPredicted RBP27.24■■□□□ 1.95
CHFR-218ENST00000540963 PCDHGA7Q9Y5G6 932 aa27.24■■□□□ 1.95
CHFR-218ENST00000540963 NAV2Q8IVL1 2488 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 C16orf96A6NNT2 1141 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 TMX2-CTNND1H3BSU7 103 aa27.23■■□□□ 1.95
CHFR-218ENST00000540963 NTN3O00634 580 aaPredicted RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms