RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 MYO5BQ9ULV0 1848 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 ABCA8O94911 1581 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 FKBP9O95302 570 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 AP3M2P53677 418 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 KCNK10P57789 538 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 CLPPQ16740 277 aaPredicted RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 CPT1BQ92523 772 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 TOP1MTQ969P6 601 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 C8orf48Q96LL4 319 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 C7orf26Q96N11 449 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 SLC29A1Q99808 456 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 MSTO1Q9BUK6 570 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 CLEC4MQ9H2X3 399 aaPredicted RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 RMND5AQ9H871 391 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 ERVK13-1Q9NX77 482 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 NCKIPSDQ9NZQ3 722 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 DNAJB4Q9UDY4 337 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 PTBP2Q9UKA9 531 aaKnown RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 GINS2Q9Y248 185 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 TRAF6Q9Y4K3 522 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 UBAP1LF5GYI3 381 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 RFPL2O75678 378 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 RBL1P28749 1068 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 EVI2BP34910 448 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 POU6F2P78424 691 aaPredicted RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 AOC3Q16853 763 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 MTERF2Q49AM1 385 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 CYP27C1Q4G0S4 372 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 SPESP1Q6UW49 350 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 GRAMD2AQ8IUY3 354 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 ELMOD1Q8N336 334 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 RXFP2Q8WXD0 754 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 CPB2Q96IY4 423 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 THUMPD3Q9BV44 507 aaKnown RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 ANKMY1Q9P2S6 941 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 UFL1O94874 794 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 ARNTP27540 789 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 CSHL1Q14406 222 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 GRM2Q14416 872 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 ARHGEF6Q15052 776 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 IGSF11Q5DX21 431 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 ATAD3CQ5T2N8 411 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 P3H2Q8IVL5 708 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 GTF2H4Q92759 462 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 KAT6AQ92794 2004 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 RUBCNLQ9H714 662 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 SARS2Q9NP81 518 aaKnown RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 IL37Q9NZH6 218 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 LAMA4Q16363 1823 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 FAM172BPA6NC97 362 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 RSL1D1O76021 490 aaKnown RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 ITGB6P18564 788 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 MS4A2Q01362 244 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 RHAGQ02094 409 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 KRR1Q13601 381 aaKnown RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 SIM2Q14190 667 aaPredicted RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 ERFEQ4G0M1 354 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 SGO1Q5FBB7 561 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 GARNL3Q5VVW2 1013 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 GALNT11Q8NCW6 608 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 RP9Q8TA86 221 aaKnown RBP11.2□□□□□ -0.62
PBX1-212ENST00000540236 NTN4Q9HB63 628 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 FANCFQ9NPI8 374 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 ARHGEF4Q9NR80 690 aa11.2□□□□□ -0.62
PBX1-212ENST00000540236 PIPSLA2A3N6 862 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 SUPT7LO94864 414 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 PRELPP51888 382 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 ARHGAP17Q68EM7 881 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 TTC23LQ6PF05 361 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 FAM131AQ6UXB0 335 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 ARHGAP36Q6ZRI8 547 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 CYP2U1Q7Z449 544 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 CHSY1Q86X52 802 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 LZTR1Q8N653 840 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 OR8K3Q8NH51 312 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 CEP170P1Q96L14 293 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 RSAD1Q9HA92 442 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 PLSCR3Q9NRY6 295 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 BTRCQ9Y297 605 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 ALKQ9UM73 1620 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 TEX46H3BTG2 121 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 YWHABP31946 246 aaKnown RBP11.19□□□□□ -0.62
PBX1-212ENST00000540236 RUNX1T1Q06455 604 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 IKBKEQ14164 716 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 QPRTQ15274 297 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 DALRD3Q5D0E6 543 aaKnown RBP11.19□□□□□ -0.62
PBX1-212ENST00000540236 BPHLQ86WA6 291 aaPredicted RBP11.19□□□□□ -0.62
PBX1-212ENST00000540236 CENPLQ8N0S6 344 aaPredicted RBP11.19□□□□□ -0.62
PBX1-212ENST00000540236 SLAIN1Q8ND83 568 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 UCK2Q9BZX2 261 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 MMP28Q9H239 520 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 LIMD1Q9UGP4 676 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 EDARQ9UNE0 448 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 ZNF652Q9Y2D9 606 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 SNAP29O95721 258 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 SMARCB1Q12824 385 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 MAMLD1Q13495 774 aa11.19□□□□□ -0.62
PBX1-212ENST00000540236 ZNF460Q14592 562 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms