RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 SARDHQ9UL12 918 aa6.29□□□□□ -1.4
MRE11-209ENST00000540013 SMC3Q9UQE7 1217 aa6.29□□□□□ -1.4
MRE11-209ENST00000540013 PLEKHM1Q9Y4G2 1056 aa6.29□□□□□ -1.4
MRE11-209ENST00000540013 AP1M2Q9Y6Q5 423 aa6.29□□□□□ -1.4
MRE11-209ENST00000540013 ARFGEF1Q9Y6D6 1849 aa6.29□□□□□ -1.4
MRE11-209ENST00000540013 CEMIPQ8WUJ3 1361 aa6.29□□□□□ -1.4
MRE11-209ENST00000540013 USP42Q9H9J4 1324 aaKnown RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 PEX12O00623 359 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 BCAT2O15382 392 aaPredicted RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 CCP110O43303 1012 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 DNAJB5O75953 348 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 CAMTA2O94983 1202 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 PDE8BO95263 885 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 OLFM2O95897 454 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 CYP2A6P11509 494 aaPredicted RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 CYP19A1P11511 503 aaPredicted RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 ALADP13716 330 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 TNNT1P13805 278 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 TPH1P17752 444 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 HSPA4P34932 840 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 GPD2P43304 727 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 RPL7AP62424 266 aaKnown RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 IFT88Q13099 833 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 FOXE3Q13461 319 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 ATP1A4Q13733 1029 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 TOB2Q14106 344 aaPredicted RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 ARHGEF7Q14155 803 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 GRM4Q14833 912 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 LASP1Q14847 261 aaKnown RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 UBXN2BQ14CS0 331 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 PABPC1LQ4VXU2 614 aaKnown RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 KRBOX4Q5JUW0 171 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 FCRL6Q6DN72 434 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 ZNF790Q6PG37 636 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 CCBE1Q6UXH8 406 aaPredicted RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 MON1AQ86VX9 555 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 CNTROBQ8N137 903 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 ANKRD44Q8N8A2 993 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 IL17RDQ8NFM7 739 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 SPATA20Q8TB22 786 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 SMCR8Q8TEV9 937 aaPredicted RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 PRPF31Q8WWY3 499 aaKnown RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 SEPT1Q8WYJ6 367 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 SYAP1Q96A49 352 aaPredicted RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 PERPQ96FX8 193 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 LENG8Q96PV6 779 aaPredicted RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 GCNAQ96QF7 691 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 TTPALQ9BTX7 342 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 KLHL4Q9C0H6 718 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 MS4A7Q9GZW8 240 aaPredicted RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 INTS2Q9H0H0 1204 aaKnown RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 TAOK3Q9H2K8 898 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 TASP1Q9H6P5 420 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 FANCFQ9NPI8 374 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 SIRT3Q9NTG7 399 aaPredicted RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 RLIMQ9NVW2 624 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 EHD2Q9NZN4 543 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 DKK4Q9UBT3 224 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 SLCO3A1Q9UIG8 710 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 LAMP5Q9UJQ1 280 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 SORCS3Q9UPU3 1222 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 LIPT1Q9Y234 373 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 RUVBL1Q9Y265 456 aaKnown RBP6.28□□□□□ -1.4
MRE11-209ENST00000540013 ZBTB1Q9Y2K1 713 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 GDAQ9Y2T3 454 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 KCNE2Q9Y6J6 123 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 COL15A1P39059 1388 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 HEG1Q9ULI3 1381 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 PXDNLA1KZ92 1463 aa6.28□□□□□ -1.4
MRE11-209ENST00000540013 GAGE12BA1L429 117 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 GAGE12HA6NDE8 117 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 PRSS29PA6NIE9 313 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 DRGXA6NNA5 263 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 J3KTA2 159 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 PGRMC2O15173 223 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 SEPT4O43236 478 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 SCAF4O95104 1147 aaKnown RBP6.27□□□□□ -1.41
MRE11-209ENST00000540013 KIF20AO95235 890 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 GNAI2P04899 355 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 HLA-DOAP06340 250 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 GRPP07492 148 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 HEXBP07686 556 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 INSRRP14616 1297 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 PTAFRP25105 342 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 HOXC8P31273 242 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 PTGS2P35354 604 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 SLC26A5P58743 744 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 TGFB2P61812 414 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 MRPS5P82675 430 aaKnown RBP6.27□□□□□ -1.41
MRE11-209ENST00000540013 HTD2P86397 168 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 NHLH2Q02577 135 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 COX10Q12887 443 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 CBX3Q13185 183 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 PDCLQ13371 301 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 MED22Q15528 200 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 KBTBD12Q3ZCT8 623 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 MIIPQ5JXC2 388 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 KLHL10Q6JEL2 608 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 TMEM154Q6P9G4 183 aa6.27□□□□□ -1.41
MRE11-209ENST00000540013 ZDHHC24Q6UX98 284 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms