RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 COG7P83436 770 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 CDC16Q13042 620 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 DLG2Q15700 870 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 SLC9B1Q4ZJI4 515 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 PM20D1Q6GTS8 502 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 TWF2Q6IBS0 349 aaKnown RBP14.75□□□□□ -0.05
CDCA3-207ENST00000538862 ZYG11AQ6WRX3 759 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 FRMD7Q6ZUT3 714 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 ZSCAN18Q8TBC5 510 aaPredicted RBP14.75□□□□□ -0.05
CDCA3-207ENST00000538862 PCED1BQ96HM7 432 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 CNDP1Q96KN2 507 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 TRAPPC9Q96Q05 1148 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 KCNK16Q96T55 309 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 GATA5Q9BWX5 397 aaPredicted RBP14.75□□□□□ -0.05
CDCA3-207ENST00000538862 OXCT2Q9BYC2 517 aaPredicted RBP14.75□□□□□ -0.05
CDCA3-207ENST00000538862 PBX4Q9BYU1 374 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 DRC3Q9H069 523 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 MTIF3Q9H2K0 278 aaKnown RBP14.75□□□□□ -0.05
CDCA3-207ENST00000538862 RHOJQ9H4E5 214 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 TCF7L2Q9NQB0 619 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 TLK1Q9UKI8 766 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 CDH9Q9ULB4 789 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 SHROOM3Q8TF72 1996 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 LOC100653049A0A140TA62 436 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.74□□□□□ -0.05
CDCA3-207ENST00000538862 HHLA1C9JL84 531 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 MATN2O00339 956 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 ZBTB14O43829 449 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 AHCYL1O43865 530 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 KRT34O76011 436 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 FESP07332 822 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 COL6A2P12110 1019 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 MYOGP15173 224 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 ADSLP30566 484 aaPredicted RBP14.74□□□□□ -0.05
CDCA3-207ENST00000538862 MTTPP55157 894 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 TBL3Q12788 808 aaKnown RBP14.74□□□□□ -0.05
CDCA3-207ENST00000538862 ASPHQ12797 758 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 CUL3Q13618 768 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 GPRIN1Q7Z2K8 1008 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 SLC26A7Q8TE54 656 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 PYDC1Q8WXC3 89 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 IRGQQ8WZA9 623 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 TSNARE1Q96NA8 513 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 C1QTNF1Q9BXJ1 281 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 TTYH1Q9H313 450 aaPredicted RBP14.74□□□□□ -0.05
CDCA3-207ENST00000538862 MICAL3Q7RTP6 2002 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 MYBPHLA2RUH7 354 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 HDAC3O15379 428 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 SMIM24O75264 130 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 UPP2O95045 317 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 JCHAINP01591 159 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 CHRNA1P02708 482 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 LYNP07948 512 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 SRGAP2BP0DMP2 458 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 THRAP10827 490 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 NMBRP28336 390 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 MTA1Q13330 715 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 UGP2Q16851 508 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 LIPMQ5VYY2 423 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 TAF2Q6P1X5 1199 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 ZC3HC1Q86WB0 502 aaKnown RBP14.74□□□□□ -0.05
CDCA3-207ENST00000538862 PDSS2Q86YH6 399 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 TMEM151AQ8N4L1 468 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 DBF4BQ8NFT6 615 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 SHKBP1Q8TBC3 707 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 MAPK15Q8TD08 544 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 SMARCD1Q96GM5 515 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 ZFP42Q96MM3 310 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 TSC22D3Q99576 134 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 ACE2Q9BYF1 805 aaPredicted RBP14.74□□□□□ -0.05
CDCA3-207ENST00000538862 FAM192AQ9GZU8 254 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 TKTL2Q9H0I9 626 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 SLC24A3Q9HC58 644 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 SPATS2LQ9NUQ6 558 aaKnown RBP14.74□□□□□ -0.05
CDCA3-207ENST00000538862 VTI1BQ9UEU0 232 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 SLC39A10Q9ULF5 831 aa14.74□□□□□ -0.05
CDCA3-207ENST00000538862 AAR2Q9Y312 384 aaKnown RBP14.74□□□□□ -0.05
CDCA3-207ENST00000538862 FNDC1Q4ZHG4 1894 aaPredicted RBP14.73□□□□□ -0.05
CDCA3-207ENST00000538862 E9PBE3 544 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 SLCO1B7G3V0H7 640 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 KLHL41O60662 606 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 LRIG2O94898 1065 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 ERFP50548 548 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 RPL14P50914 215 aaKnown RBP14.73□□□□□ -0.05
CDCA3-207ENST00000538862 RPL26P61254 145 aaKnown RBP14.73□□□□□ -0.05
CDCA3-207ENST00000538862 DEFB103AP81534 67 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 PRKAA1Q13131 559 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 GRM3Q14832 879 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 PCID2Q5JVF3 399 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 ZNF697Q5TEC3 545 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 GPR153Q6NV75 609 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 CNKSR3Q6P9H4 555 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 RNF111Q6ZNA4 994 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 RAPH1Q70E73 1250 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 BHLHA9Q7RTU4 235 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 CCDC117Q8IWD4 279 aaPredicted RBP14.73□□□□□ -0.05
CDCA3-207ENST00000538862 SCML4Q8N228 414 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 APOL2Q9BQE5 337 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 SHCBP1LQ9BZQ2 653 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 KLHL4Q9C0H6 718 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms