RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 SETD3Q86TU7 594 aaPredicted RBP20.66■□□□□ 0.9
DDX55-205ENST00000538744 OR7D4Q8NG98 312 aa20.66■□□□□ 0.9
DDX55-205ENST00000538744 TSSK1BQ9BXA7 367 aa20.66■□□□□ 0.9
DDX55-205ENST00000538744 SNX15Q9NRS6 342 aa20.66■□□□□ 0.9
DDX55-205ENST00000538744 BIRC5O15392 142 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 FGBP02675 491 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 RHOCP08134 193 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 TROVE2P10155 538 aaKnown RBP eCLIP20.65■□□□□ 0.9
DDX55-205ENST00000538744 HADHAP40939 763 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 SGSHP51688 502 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 OXCT1P55809 520 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 SMAD3P84022 425 aaKnown RBP20.65■□□□□ 0.9
DDX55-205ENST00000538744 KIAA0930Q6ICG6 404 aaPredicted RBP20.65■□□□□ 0.9
DDX55-205ENST00000538744 ESRP1Q6NXG1 681 aaKnown RBP20.65■□□□□ 0.9
DDX55-205ENST00000538744 CNTN4Q8IWV2 1026 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 WBP2Q969T9 261 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 ATXN7L3BQ96GX2 97 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 ZFRQ96KR1 1074 aaKnown RBP20.65■□□□□ 0.9
DDX55-205ENST00000538744 SEMA3CQ99985 751 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 MCMBPQ9BTE3 642 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 IL21Q9HBE4 155 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 TREX1Q9NSU2 369 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 ABCF3Q9NUQ8 709 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 SMPD4Q9NXE4 827 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 STOML2Q9UJZ1 356 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 DENND4CQ5VZ89 1909 aa20.65■□□□□ 0.9
DDX55-205ENST00000538744 TGM5O43548 720 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 KDELR3O43731 214 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 TSPAN3O60637 253 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 VAPBO95292 243 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 IL1BP01584 269 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 LINC00271P0C7V0 271 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 SPATA31D3P0C874 917 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 DBN1Q16643 649 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 UGP2Q16851 508 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 SPATA31D4Q6ZUB0 917 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 OR52K2Q8NGK3 314 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 RAB3IL1Q8TBN0 382 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 VPS39Q96JC1 886 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 ZBED2Q9BTP6 218 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 SPON2Q9BUD6 331 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 SIRPGQ9P1W8 387 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 UBA2Q9UBT2 640 aaPredicted RBP20.64■□□□□ 0.9
DDX55-205ENST00000538744 SEPT3Q9UH03 358 aa20.64■□□□□ 0.9
DDX55-205ENST00000538744 MTO1Q9Y2Z2 717 aaKnown RBP20.64■□□□□ 0.9
DDX55-205ENST00000538744 KIAA0100Q14667 2235 aaKnown RBP20.64■□□□□ 0.9
DDX55-205ENST00000538744 GOLGA8TH3BQL2 631 aa20.64■□□□□ 0.89
DDX55-205ENST00000538744 TOP3BO95985 862 aaKnown RBP20.64■□□□□ 0.89
DDX55-205ENST00000538744 MPOP05164 745 aa20.64■□□□□ 0.89
DDX55-205ENST00000538744 BPGMP07738 259 aa20.64■□□□□ 0.89
DDX55-205ENST00000538744 ARCN1P48444 511 aaKnown RBP20.64■□□□□ 0.89
DDX55-205ENST00000538744 IHHQ14623 411 aa20.64■□□□□ 0.89
DDX55-205ENST00000538744 N4BP2L1Q5TBK1 243 aaPredicted RBP20.64■□□□□ 0.89
DDX55-205ENST00000538744 ATG16L1Q676U5 607 aa20.64■□□□□ 0.89
DDX55-205ENST00000538744 ALG1LQ6GMV1 187 aa20.64■□□□□ 0.89
DDX55-205ENST00000538744 NUDCD3Q8IVD9 361 aa20.64■□□□□ 0.89
DDX55-205ENST00000538744 CLP1Q92989 425 aaKnown RBP20.64■□□□□ 0.89
DDX55-205ENST00000538744 RHOJQ9H4E5 214 aa20.64■□□□□ 0.89
DDX55-205ENST00000538744 SLC2A6Q9UGQ3 507 aa20.64■□□□□ 0.89
DDX55-205ENST00000538744 TBC1D30Q9Y2I9 924 aa20.64■□□□□ 0.89
DDX55-205ENST00000538744 INSL6Q9Y581 213 aa20.64■□□□□ 0.89
DDX55-205ENST00000538744 USH1CQ9Y6N9 552 aa20.64■□□□□ 0.89
DDX55-205ENST00000538744 LOC285095A0A1B0GVY8 99 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 TTC24A2A3L6 582 aaPredicted RBP20.63■□□□□ 0.89
DDX55-205ENST00000538744 MUSKO15146 869 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 SIN3BO75182 1162 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 OLFM2O95897 454 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 LRG1P02750 347 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 GSTA1P08263 222 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 LIG3P49916 1009 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 THOC5Q13769 683 aaKnown RBP20.63■□□□□ 0.89
DDX55-205ENST00000538744 RFTN1Q14699 578 aaPredicted RBP20.63■□□□□ 0.89
DDX55-205ENST00000538744 CNGA3Q16281 694 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 SIRPB2Q5JXA9 342 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 CCDC149Q6ZUS6 474 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 CMC1Q7Z7K0 106 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 GBP7Q8N8V2 638 aaPredicted RBP20.63■□□□□ 0.89
DDX55-205ENST00000538744 KLHL23Q8NBE8 558 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 ZNF398Q8TD17 642 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 E2F7Q96AV8 911 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 IFT43Q96FT9 208 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 THOC1Q96FV9 657 aaKnown RBP20.63■□□□□ 0.89
DDX55-205ENST00000538744 FEM1CQ96JP0 617 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 RMDN2Q96LZ7 410 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 SLC22A12Q96S37 553 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 CYP2S1Q96SQ9 504 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 MGME1Q9BQP7 344 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 FAM167BQ9BTA0 163 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 MECRQ9BV79 373 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 EMCNQ9ULC0 261 aa20.63■□□□□ 0.89
DDX55-205ENST00000538744 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.62■□□□□ 0.89
DDX55-205ENST00000538744 PLIN3O60664 434 aa20.62■□□□□ 0.89
DDX55-205ENST00000538744 FSBPO95073 299 aa20.62■□□□□ 0.89
DDX55-205ENST00000538744 CXCL14O95715 111 aa20.62■□□□□ 0.89
DDX55-205ENST00000538744 ADH1AP07327 375 aa20.62■□□□□ 0.89
DDX55-205ENST00000538744 HDCP19113 662 aa20.62■□□□□ 0.89
DDX55-205ENST00000538744 ARNTP27540 789 aa20.62■□□□□ 0.89
DDX55-205ENST00000538744 LBX1P52954 281 aa20.62■□□□□ 0.89
DDX55-205ENST00000538744 SLC14A2Q15849 920 aa20.62■□□□□ 0.89
DDX55-205ENST00000538744 PPM1JQ5JR12 505 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms