RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 FEM1CQ96JP0 617 aa8.8□□□□□ -1
DDB1-212ENST00000538470 LENG8Q96PV6 779 aaPredicted RBP8.8□□□□□ -1
DDB1-212ENST00000538470 DUSP23Q9BVJ7 150 aa8.8□□□□□ -1
DDB1-212ENST00000538470 SELENOOQ9BVL4 669 aa8.8□□□□□ -1
DDB1-212ENST00000538470 SLC17A9Q9BYT1 436 aa8.8□□□□□ -1
DDB1-212ENST00000538470 TM6SF2Q9BZW4 377 aa8.8□□□□□ -1
DDB1-212ENST00000538470 VPS16Q9H269 839 aa8.8□□□□□ -1
DDB1-212ENST00000538470 ZDHHC6Q9H6R6 413 aa8.8□□□□□ -1
DDB1-212ENST00000538470 FZD3Q9NPG1 666 aa8.8□□□□□ -1
DDB1-212ENST00000538470 LMBRD1Q9NUN5 540 aa8.8□□□□□ -1
DDB1-212ENST00000538470 NCKIPSDQ9NZQ3 722 aa8.8□□□□□ -1
DDB1-212ENST00000538470 OR12D3Q9UGF7 316 aa8.8□□□□□ -1
DDB1-212ENST00000538470 CLCA2Q9UQC9 943 aa8.8□□□□□ -1
DDB1-212ENST00000538470 SIK3Q9Y2K2 1263 aa8.8□□□□□ -1
DDB1-212ENST00000538470 FCF1Q9Y324 198 aaKnown RBP8.8□□□□□ -1
DDB1-212ENST00000538470 COL27A1Q8IZC6 1860 aaPredicted RBP8.8□□□□□ -1
DDB1-212ENST00000538470 SPTY2D1-AS1A0A0U1RR47 76 aa8.79□□□□□ -1
DDB1-212ENST00000538470 ANKRD62A6NC57 917 aa8.79□□□□□ -1
DDB1-212ENST00000538470 LGALS16A8MUM7 142 aa8.79□□□□□ -1
DDB1-212ENST00000538470 TRIM38O00635 465 aa8.79□□□□□ -1
DDB1-212ENST00000538470 TOR1BO14657 336 aa8.79□□□□□ -1
DDB1-212ENST00000538470 FPGTO14772 594 aa8.79□□□□□ -1
DDB1-212ENST00000538470 SCAMP1O15126 338 aa8.79□□□□□ -1
DDB1-212ENST00000538470 LZTS3O60299 673 aaPredicted RBP8.79□□□□□ -1
DDB1-212ENST00000538470 LRIG2O94898 1065 aa8.79□□□□□ -1
DDB1-212ENST00000538470 CD160O95971 181 aa8.79□□□□□ -1
DDB1-212ENST00000538470 IGSF6O95976 241 aa8.79□□□□□ -1
DDB1-212ENST00000538470 KRT3P12035 628 aa8.79□□□□□ -1
DDB1-212ENST00000538470 CKMT1AP12532 417 aa8.79□□□□□ -1
DDB1-212ENST00000538470 NME1P15531 152 aaKnown RBP8.79□□□□□ -1
DDB1-212ENST00000538470 GPD1P21695 349 aa8.79□□□□□ -1
DDB1-212ENST00000538470 HTR7P34969 479 aa8.79□□□□□ -1
DDB1-212ENST00000538470 ACVRL1P37023 503 aa8.79□□□□□ -1
DDB1-212ENST00000538470 DUSP3P51452 185 aaPredicted RBP8.79□□□□□ -1
DDB1-212ENST00000538470 DNA2P51530 1060 aa8.79□□□□□ -1
DDB1-212ENST00000538470 COPB1P53618 953 aaKnown RBP8.79□□□□□ -1
DDB1-212ENST00000538470 HDAC4P56524 1084 aa8.79□□□□□ -1
DDB1-212ENST00000538470 INSM1Q01101 510 aaPredicted RBP8.79□□□□□ -1
DDB1-212ENST00000538470 MYL5Q02045 173 aa8.79□□□□□ -1
DDB1-212ENST00000538470 C1QBPQ07021 282 aaKnown RBP8.79□□□□□ -1
DDB1-212ENST00000538470 PTP4A2Q12974 167 aa8.79□□□□□ -1
DDB1-212ENST00000538470 TARDBPQ13148 414 aaKnown RBP eCLIP8.79□□□□□ -1
DDB1-212ENST00000538470 ACAP1Q15027 740 aa8.79□□□□□ -1
DDB1-212ENST00000538470 CLEC16AQ2KHT3 1053 aa8.79□□□□□ -1
DDB1-212ENST00000538470 C15orf59Q2T9L4 293 aaPredicted RBP8.79□□□□□ -1
DDB1-212ENST00000538470 PPP1R2P3Q6NXS1 205 aa8.79□□□□□ -1
DDB1-212ENST00000538470 PHF13Q86YI8 300 aaPredicted RBP8.79□□□□□ -1
DDB1-212ENST00000538470 SLC25A45Q8N413 288 aa8.79□□□□□ -1
DDB1-212ENST00000538470 RTL3Q8N8U3 475 aaKnown RBP8.79□□□□□ -1
DDB1-212ENST00000538470 FAM181AQ8N9Y4 354 aa8.79□□□□□ -1
DDB1-212ENST00000538470 NEK11Q8NG66 645 aa8.79□□□□□ -1
DDB1-212ENST00000538470 JOSD2Q8TAC2 188 aa8.79□□□□□ -1
DDB1-212ENST00000538470 FAM172AQ8WUF8 416 aa8.79□□□□□ -1
DDB1-212ENST00000538470 HNRNPLLQ8WVV9 542 aaKnown RBP8.79□□□□□ -1
DDB1-212ENST00000538470 BAP1Q92560 729 aa8.79□□□□□ -1
DDB1-212ENST00000538470 KLK6Q92876 244 aa8.79□□□□□ -1
DDB1-212ENST00000538470 TBATAQ96M53 351 aa8.79□□□□□ -1
DDB1-212ENST00000538470 GDAP1L1Q96MZ0 367 aa8.79□□□□□ -1
DDB1-212ENST00000538470 NLRC4Q9NPP4 1024 aa8.79□□□□□ -1
DDB1-212ENST00000538470 ADAM22Q9P0K1 906 aa8.79□□□□□ -1
DDB1-212ENST00000538470 HECAQ9UBI9 543 aaPredicted RBP8.79□□□□□ -1
DDB1-212ENST00000538470 LIMA1Q9UHB6 759 aaKnown RBP8.79□□□□□ -1
DDB1-212ENST00000538470 DNAI1Q9UI46 699 aa8.79□□□□□ -1
DDB1-212ENST00000538470 SHROOM3Q8TF72 1996 aa8.79□□□□□ -1
DDB1-212ENST00000538470 ASXL3Q9C0F0 2248 aa8.78□□□□□ -1
DDB1-212ENST00000538470 RP1P56715 2156 aa8.78□□□□□ -1
DDB1-212ENST00000538470 SMG1Q96Q15 3661 aaKnown RBP8.78□□□□□ -1
DDB1-212ENST00000538470 FAM170AA1A519 330 aa8.78□□□□□ -1
DDB1-212ENST00000538470 C16orf96A6NNT2 1141 aa8.78□□□□□ -1
DDB1-212ENST00000538470 RNF103O00237 685 aa8.78□□□□□ -1
DDB1-212ENST00000538470 NEMP1O14524 444 aa8.78□□□□□ -1
DDB1-212ENST00000538470 EPHB6O15197 1021 aa8.78□□□□□ -1
DDB1-212ENST00000538470 FGF10O15520 208 aaPredicted RBP8.78□□□□□ -1
DDB1-212ENST00000538470 FFAR2O15552 330 aa8.78□□□□□ -1
DDB1-212ENST00000538470 KDELR3O43731 214 aa8.78□□□□□ -1
DDB1-212ENST00000538470 TMCC1O94876 653 aa8.78□□□□□ -1
DDB1-212ENST00000538470 POP4O95707 220 aaKnown RBP8.78□□□□□ -1
DDB1-212ENST00000538470 CSF2P04141 144 aa8.78□□□□□ -1
DDB1-212ENST00000538470 PLEKP08567 350 aaPredicted RBP8.78□□□□□ -1
DDB1-212ENST00000538470 CCDC172P0C7W6 258 aa8.78□□□□□ -1
DDB1-212ENST00000538470 GIMD1P0DJR0 217 aa8.78□□□□□ -1
DDB1-212ENST00000538470 HOXB3P14651 431 aaPredicted RBP8.78□□□□□ -1
DDB1-212ENST00000538470 ACTN2P35609 894 aa8.78□□□□□ -1
DDB1-212ENST00000538470 ABL2P42684 1182 aa8.78□□□□□ -1
DDB1-212ENST00000538470 KLK7P49862 253 aa8.78□□□□□ -1
DDB1-212ENST00000538470 SUOXP51687 545 aa8.78□□□□□ -1
DDB1-212ENST00000538470 CLDN6P56747 220 aa8.78□□□□□ -1
DDB1-212ENST00000538470 CLDN2P57739 230 aa8.78□□□□□ -1
DDB1-212ENST00000538470 YBEYP58557 167 aaPredicted RBP8.78□□□□□ -1
DDB1-212ENST00000538470 PFN3P60673 137 aa8.78□□□□□ -1
DDB1-212ENST00000538470 RAD51Q06609 339 aa8.78□□□□□ -1
DDB1-212ENST00000538470 SGCGQ13326 291 aa8.78□□□□□ -1
DDB1-212ENST00000538470 COL9A2Q14055 689 aaPredicted RBP8.78□□□□□ -1
DDB1-212ENST00000538470 FGL2Q14314 439 aa8.78□□□□□ -1
DDB1-212ENST00000538470 FZD2Q14332 565 aa8.78□□□□□ -1
DDB1-212ENST00000538470 STX1AQ16623 288 aa8.78□□□□□ -1
DDB1-212ENST00000538470 PARP15Q460N3 678 aa8.78□□□□□ -1
DDB1-212ENST00000538470 INO80DQ53TQ3 878 aaPredicted RBP8.78□□□□□ -1
DDB1-212ENST00000538470 CDCP2Q5VXM1 449 aa8.78□□□□□ -1
DDB1-212ENST00000538470 ZCCHC8Q6NZY4 707 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms