RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 CSF2P04141 144 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 RHOQP17081 205 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 CHRNB2P17787 502 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 PTPN9P43378 593 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 RABIFP47224 123 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 JAM2P57087 298 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 GEMIN4P57678 1058 aaKnown RBP17■□□□□ 0.31
PTPN6-210ENST00000538318 HNRNPKP61978 463 aaKnown RBP eCLIP17■□□□□ 0.31
PTPN6-210ENST00000538318 CDO1Q16878 200 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 ZNF542PQ5EBM4 170 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 CDCP2Q5VXM1 449 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 KDM7AQ6ZMT4 941 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 STRADAQ7RTN6 431 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 JOSD2Q8TAC2 188 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 BAP1Q92560 729 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 CENPIQ92674 756 aaPredicted RBP17■□□□□ 0.31
PTPN6-210ENST00000538318 ARHGEF2Q92974 986 aaKnown RBP17■□□□□ 0.31
PTPN6-210ENST00000538318 RAB7BQ96AH8 199 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 VOPP1Q96AW1 172 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 KLF6Q99612 283 aaPredicted RBP17■□□□□ 0.31
PTPN6-210ENST00000538318 DUSP23Q9BVJ7 150 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 TM6SF2Q9BZW4 377 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 MAGEH1Q9H213 219 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 PRORYQ9H606 182 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 USP29Q9HBJ7 922 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 TMEM248Q9NWD8 314 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 TAB2Q9NYJ8 693 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 U3KQA8 63 aa17■□□□□ 0.31
PTPN6-210ENST00000538318 C16orf96A6NNT2 1141 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 FAM72CH0Y354 149 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 K7ESM1 405 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 OPA1O60313 960 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 LRIG2O94898 1065 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 GSRP00390 522 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 NME1P15531 152 aaKnown RBP16.99■□□□□ 0.31
PTPN6-210ENST00000538318 ACTN2P35609 894 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 SGCGQ13326 291 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 TBC1D25Q3MII6 688 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 ZNF805Q5CZA5 627 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 FAM72AQ5TYM5 149 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 FAM72DQ6L9T8 149 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 RWDD4Q6NW29 188 aaKnown RBP16.99■□□□□ 0.31
PTPN6-210ENST00000538318 PARGQ86W56 976 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 FAM72BQ86X60 149 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 ZNF548Q8NEK5 533 aaPredicted RBP16.99■□□□□ 0.31
PTPN6-210ENST00000538318 OR2AP1Q8NGE2 309 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 SLC30A5Q8TAD4 765 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 ENOX1Q8TC92 643 aaKnown RBP16.99■□□□□ 0.31
PTPN6-210ENST00000538318 GPT2Q8TD30 523 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 ASB12Q8WXK4 309 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 UBL7Q96S82 380 aaPredicted RBP16.99■□□□□ 0.31
PTPN6-210ENST00000538318 C11orf70Q9BRQ4 267 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 MAGEB5Q9BZ81 275 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 DNAI1Q9UI46 699 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 HPCAL4Q9UM19 191 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 PCDHB1Q9Y5F3 818 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 CSNK1G3Q9Y6M4 447 aa16.99■□□□□ 0.31
PTPN6-210ENST00000538318 IGLON5A6NGN9 336 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 H3BM21 787 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 FPGTO14772 594 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 NEBLO76041 1014 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 PLEKP08567 350 aaPredicted RBP16.98■□□□□ 0.31
PTPN6-210ENST00000538318 UNGP13051 313 aaPredicted RBP16.98■□□□□ 0.31
PTPN6-210ENST00000538318 MYF5P13349 255 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 GKP32189 559 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 SOX5P35711 763 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 ABL2P42684 1182 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 KLK7P49862 253 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 DUSP3P51452 185 aaPredicted RBP16.98■□□□□ 0.31
PTPN6-210ENST00000538318 HDAC4P56524 1084 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 GSCP56915 257 aaPredicted RBP16.98■□□□□ 0.31
PTPN6-210ENST00000538318 POLR2FP61218 127 aaKnown RBP16.98■□□□□ 0.31
PTPN6-210ENST00000538318 SNRPD1P62314 119 aaKnown RBP16.98■□□□□ 0.31
PTPN6-210ENST00000538318 PTP4A2Q12974 167 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 PDE1CQ14123 709 aaPredicted RBP16.98■□□□□ 0.31
PTPN6-210ENST00000538318 POLD3Q15054 466 aaPredicted RBP16.98■□□□□ 0.31
PTPN6-210ENST00000538318 CDKAL1Q5VV42 579 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 TRIM72Q6ZMU5 477 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 PHLDB2Q86SQ0 1253 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 RYBPQ8N488 228 aaPredicted RBP16.98■□□□□ 0.31
PTPN6-210ENST00000538318 CCDC185Q8N715 623 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 DENND6BQ8NEG7 585 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 OR6K2Q8NGY2 324 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 VPS16Q9H269 839 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 KLF15Q9UIH9 416 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 DAAM1Q9Y4D1 1078 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 RAI2Q9Y5P3 530 aa16.98■□□□□ 0.31
PTPN6-210ENST00000538318 EIF4E1BA6NMX2 242 aaKnown RBP16.97■□□□□ 0.31
PTPN6-210ENST00000538318 KRIT1O00522 736 aa16.97■□□□□ 0.31
PTPN6-210ENST00000538318 EPHB6O15197 1021 aa16.97■□□□□ 0.31
PTPN6-210ENST00000538318 SPINT1O43278 529 aa16.97■□□□□ 0.31
PTPN6-210ENST00000538318 RAMP2O60895 175 aa16.97■□□□□ 0.31
PTPN6-210ENST00000538318 GJB6O95452 261 aa16.97■□□□□ 0.31
PTPN6-210ENST00000538318 POP4O95707 220 aaKnown RBP16.97■□□□□ 0.31
PTPN6-210ENST00000538318 KRT3P12035 628 aa16.97■□□□□ 0.31
PTPN6-210ENST00000538318 PFN3P60673 137 aa16.97■□□□□ 0.31
PTPN6-210ENST00000538318 KRT31Q15323 416 aa16.97■□□□□ 0.31
PTPN6-210ENST00000538318 MYLK3Q32MK0 819 aa16.97■□□□□ 0.31
PTPN6-210ENST00000538318 TPRG1LQ5T0D9 272 aa16.97■□□□□ 0.31
PTPN6-210ENST00000538318 ZCCHC8Q6NZY4 707 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms