RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 SEPHS1P49903 392 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 MFAP3P55082 362 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 ZNF33BQ06732 778 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 TRIM28Q13263 835 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 STXBP4Q6ZWJ1 553 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 PTAR1Q7Z6K3 402 aaPredicted RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 OFCC1Q8IZS5 231 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 CARNMT1Q8N4J0 409 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 KCNH5Q8NCM2 988 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 FLCNQ8NFG4 579 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 RSAD2Q8WXG1 361 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 LPGAT1Q92604 370 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 FBXL20Q96IG2 436 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 HEXIM2Q96MH2 286 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 RUSC1Q9BVN2 902 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 DNAI2Q9GZS0 605 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 ING2Q9H160 280 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 MKNK2Q9HBH9 465 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 MRPL47Q9HD33 250 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 CHST12Q9NRB3 414 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 TOPORSQ9NS56 1045 aaPredicted RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 SMPD3Q9NY59 655 aaPredicted RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 TMCC3Q9ULS5 477 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 PCDHGA10Q9Y5H3 936 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 KIF1AQ12756 1690 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 ADAMTS7Q9UKP4 1686 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 LOC102724428A0A0B4J2F2 783 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 PNMA6FA0A0J9YX94 578 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 HEATR9A2RTY3 570 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 TYW5A2RUC4 315 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 STX16-NPEPL1H3BU86 382 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 COL6A1P12109 1028 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 CNTFP26441 200 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 DPP6P42658 865 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 YAP1P46937 504 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 PRIM2P49643 509 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 SIK1P57059 783 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 RPS6P62753 249 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 AP3B2Q13367 1082 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 TOP3AQ13472 1001 aaPredicted RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 SKIV2LQ15477 1246 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 CHRNA2Q15822 529 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 CTF1Q16619 201 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 KIZQ2M2Z5 673 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 LEXMQ3ZCV2 418 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 KCNT1Q5JUK3 1230 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 RBM48Q5RL73 367 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 STEAP3Q658P3 488 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 SLC16A12Q6ZSM3 486 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 HDDC2Q7Z4H3 204 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 NOXA1Q86UR1 476 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 ADGRF2Q8IZF7 708 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 ZBTB38Q8NAP3 1195 aaPredicted RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 FAM156AQ8NDB6 213 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 GTF2H4Q92759 462 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 SNAPC3Q92966 411 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 FAM89AQ96GI7 184 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 CCDC120Q96HB5 630 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 FRMD8P1Q9BZ68 369 aaPredicted RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 ZC3H12CQ9C0D7 883 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 DSN1Q9H410 356 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 RAVER2Q9HCJ3 691 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 TM9SF3Q9HD45 589 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 IARS2Q9NSE4 1012 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 TMEM260Q9NX78 707 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 TEX264Q9Y6I9 313 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 USP54Q70EL1 1684 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 A0A0G2JMP0 313 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 MEN1O00255 615 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 TBX1O43435 398 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 CLIC3O95833 236 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 PDGFAP04085 211 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 TGFB3P10600 412 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 IL10P22301 178 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 FASP25445 335 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 EVI2BP34910 448 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 NDST1P52848 882 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 ACTR2P61160 394 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 ACAP2Q15057 778 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 PRR16Q569H4 304 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 TOR2AQ5JU69 321 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 PODNQ7Z5L7 613 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 MCOLN2Q8IZK6 566 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 LINC00518Q8N0U6 118 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 URGCPQ8TCY9 931 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 HAS1Q92839 578 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 UNC93B1Q9H1C4 597 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 GREM2Q9H772 168 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 DCDC2Q9UHG0 476 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 TEKT2Q9UIF3 430 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 GRIP1Q9Y3R0 1128 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 RIPK3Q9Y572 518 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 PCDHGB3Q9Y5G1 929 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 SNX5Q9Y5X3 404 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 ZNF804BA4D1E1 1349 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 LTN1O94822 1766 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 H0YAE9 185 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 YKT6O15498 198 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 RASAL1O95294 804 aa8.61□□□□□ -1.03
SRGAP1-202ENST00000537556 ITGB3P05106 788 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms