RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 NLRP14Q86W24 1093 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 SLC30A5Q8TAD4 765 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 GPT2Q8TD30 523 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 BAP1Q92560 729 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ARHGEF2Q92974 986 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 C11orf70Q9BRQ4 267 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 MAGEH1Q9H213 219 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 GPR27Q9NS67 375 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 FAM207AQ9NSI2 230 aaPredicted RBP20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 NDFIP2Q9NV92 336 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 TMEM248Q9NWD8 314 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 DNAI1Q9UI46 699 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 HPCAL4Q9UM19 191 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 POM121BA6NF01 834 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 C2CD4BA6NLJ0 364 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 EIF4E1BA6NMX2 242 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 SCAMP1O15126 338 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 TSPAN6O43657 245 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 CHRNB2P17787 502 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 RABIFP47224 123 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 KLK7P49862 253 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 FZD2Q14332 565 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 POLD3Q15054 466 aaPredicted RBP20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 FKBP15Q5T1M5 1219 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 TRIM72Q6ZMU5 477 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 STRADAQ7RTN6 431 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 OR6K2Q8NGY2 324 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 JOSD2Q8TAC2 188 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 SNIP1Q8TAD8 396 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ENOX1Q8TC92 643 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 RAB7BQ96AH8 199 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 APOLD1Q96LR9 279 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 DUSP23Q9BVJ7 150 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 C1QTNF2Q9BXJ5 285 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 CAAP1Q9H8G2 361 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 USP29Q9HBJ7 922 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 NLRC4Q9NPP4 1024 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 EVA1BQ9NVM1 165 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 IPO11Q9UI26 975 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 DAAM1Q9Y4D1 1078 aa20.01■□□□□ 0.79
TNFRSF1B-204ENST00000536782 SETXQ7Z333 2677 aaKnown RBP20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 SPTY2D1-AS1A0A0U1RR47 76 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 C16orf96A6NNT2 1141 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 FAM72CH0Y354 149 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 KRIT1O00522 736 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 NEMP1O14524 444 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 FPGTO14772 594 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 RAD51BO15315 384 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 BRINP1O60477 761 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 LRIG2O94898 1065 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 GSRP00390 522 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 GKP32189 559 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ACTN2P35609 894 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 DUSP3P51452 185 aaPredicted RBP20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 JAM2P57087 298 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 SNRPD1P62314 119 aaKnown RBP20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 KRT31Q15323 416 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ZNF805Q5CZA5 627 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 FAM72AQ5TYM5 149 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 FAM72DQ6L9T8 149 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 PARGQ86W56 976 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 FAM72BQ86X60 149 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 FAM181AQ8N9Y4 354 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 OR2AP1Q8NGE2 309 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 CENPIQ92674 756 aaPredicted RBP20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 FGF11Q92914 225 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 TBC1D31Q96DN5 1066 aa20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 LENG8Q96PV6 779 aaPredicted RBP20■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ATMQ13315 3056 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 IGLON5A6NGN9 336 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 H3BM21 787 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 K7ESM1 405 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 OPA1O60313 960 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 RAMP2O60895 175 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 GJB6O95452 261 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 POP4O95707 220 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 CSF2P04141 144 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 GP1BAP07359 652 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 PLEKP08567 350 aaPredicted RBP19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 KRT3P12035 628 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 UNGP13051 313 aaPredicted RBP19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 NME1P15531 152 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 STAT1P42224 750 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ABL2P42684 1182 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 NSFP46459 744 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 CDKAL1Q5VV42 579 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 CCDC185Q8N715 623 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 FAM172AQ8WUF8 416 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ASB12Q8WXK4 309 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ARHGEF26Q96DR7 871 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 KLF6Q99612 283 aaPredicted RBP19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 OSBPL1AQ9BXW6 950 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 MAGEB5Q9BZ81 275 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 NEU3Q9UQ49 428 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 CHD5Q8TDI0 1954 aa19.99■□□□□ 0.79
TNFRSF1B-204ENST00000536782 EPHB6O15197 1021 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 NEBLO76041 1014 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 UGT2B4P06133 528 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 MYF5P13349 255 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 HDAC4P56524 1084 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms