RNA–Protein interactions for RNA: ENST00000535990.5

CLPB-206, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-206ENST00000535990 PABPC1LQ4VXU2 614 aaKnown RBP18.73■□□□□ 0.59
CLPB-206ENST00000535990 INTS6LQ5JSJ4 861 aaKnown RBP18.73■□□□□ 0.59
CLPB-206ENST00000535990 IL23RQ5VWK5 629 aa18.73■□□□□ 0.59
CLPB-206ENST00000535990 LIMS2Q7Z4I7 341 aa18.73■□□□□ 0.59
CLPB-206ENST00000535990 PCDH20Q8N6Y1 951 aaKnown RBP18.73■□□□□ 0.59
CLPB-206ENST00000535990 FAM81AQ8TBF8 368 aa18.73■□□□□ 0.59
CLPB-206ENST00000535990 STON2Q8WXE9 905 aa18.73■□□□□ 0.59
CLPB-206ENST00000535990 ATP6V1E2Q96A05 226 aa18.73■□□□□ 0.59
CLPB-206ENST00000535990 EME1Q96AY2 570 aa18.73■□□□□ 0.59
CLPB-206ENST00000535990 SGF29Q96ES7 293 aa18.73■□□□□ 0.59
CLPB-206ENST00000535990 VTA1Q9NP79 307 aa18.73■□□□□ 0.59
CLPB-206ENST00000535990 GTSE1Q9NYZ3 720 aa18.73■□□□□ 0.59
CLPB-206ENST00000535990 TRPC5OSA6NMA1 111 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 PDLIM1O00151 329 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 PGK1P00558 417 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 STMN1P16949 149 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 YBX3P16989 372 aaKnown RBP eCLIP18.72■□□□□ 0.59
CLPB-206ENST00000535990 POU6F1Q14863 301 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 DGKDQ16760 1214 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 UGP2Q16851 508 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 TSTD2Q5T7W7 516 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 LINC00523Q86TU6 105 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 EMID1Q96A84 441 aaPredicted RBP18.72■□□□□ 0.59
CLPB-206ENST00000535990 LENG1Q96BZ8 264 aaPredicted RBP18.72■□□□□ 0.59
CLPB-206ENST00000535990 SEMA6AQ9H2E6 1030 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 DDX18Q9NVP1 670 aaKnown RBP18.72■□□□□ 0.59
CLPB-206ENST00000535990 DMTF1Q9Y222 760 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 PIN4Q9Y237 131 aaKnown RBP18.72■□□□□ 0.59
CLPB-206ENST00000535990 FAM95CA0A1B0GW59 222 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 AP3B1O00203 1094 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 SDHDO14521 159 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 FAM200BP0CF97 657 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 NRF1Q16656 503 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 CTU1Q7Z7A3 348 aaKnown RBP18.72■□□□□ 0.59
CLPB-206ENST00000535990 CEP70Q8NHQ1 597 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 SPATA22Q8NHS9 363 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 GPR78Q96P69 363 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 FTHL17Q9BXU8 183 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 RBM38Q9H0Z9 239 aaKnown RBP18.72■□□□□ 0.59
CLPB-206ENST00000535990 NCKIPSDQ9NZQ3 722 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 OR12D3Q9UGF7 316 aa18.72■□□□□ 0.59
CLPB-206ENST00000535990 CAPNS1P04632 268 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 USP17L7P0C7H9 530 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 CLCN2P51788 898 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 DAOAP59103 153 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 PSME3P61289 254 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 PDAP1Q13442 181 aaKnown RBP18.71■□□□□ 0.59
CLPB-206ENST00000535990 PCID2Q5JVF3 399 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 WSCD1Q658N2 575 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 PKN3Q6P5Z2 889 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 MFSD6LQ8IWD5 586 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 TOP6BLQ8N6T0 577 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 DDI1Q8WTU0 396 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 ASB9Q96DX5 294 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 SENP6Q9GZR1 1112 aaPredicted RBP18.71■□□□□ 0.59
CLPB-206ENST00000535990 POMKQ9H5K3 350 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 TMCO1Q9UM00 188 aa18.71■□□□□ 0.59
CLPB-206ENST00000535990 PLXNB2O15031 1838 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 NPHS1O60500 1241 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 TMCC1O94876 653 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 PENKP01210 267 aaPredicted RBP18.7■□□□□ 0.58
CLPB-206ENST00000535990 HNRNPLP14866 589 aaKnown RBP eCLIP18.7■□□□□ 0.584e-10■■□□□ 13
CLPB-206ENST00000535990 DARSP14868 501 aaKnown RBP18.7■□□□□ 0.58
CLPB-206ENST00000535990 PSMC3P17980 439 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 RANBP1P43487 201 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 APOFQ13790 326 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 MGAT5BQ3V5L5 792 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 TMEM259Q4ZIN3 620 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 KIAA0319Q5VV43 1072 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 PTAR1Q7Z6K3 402 aaPredicted RBP18.7■□□□□ 0.58
CLPB-206ENST00000535990 AMIGO2Q86SJ2 522 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 GPC2Q8N158 579 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 ELMO2Q96JJ3 720 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 MAELQ96JY0 434 aaKnown RBP18.7■□□□□ 0.58
CLPB-206ENST00000535990 COLEC11Q9BWP8 271 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 PCDHAC1Q9H158 963 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 MRPL46Q9H2W6 279 aaKnown RBP18.7■□□□□ 0.58
CLPB-206ENST00000535990 WDCPQ9H6R7 721 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.7■□□□□ 0.58
CLPB-206ENST00000535990 PHF24Q9UPV7 400 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 AP4S1Q9Y587 144 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 PCDHGA7Q9Y5G6 932 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 FNDC1Q4ZHG4 1894 aaPredicted RBP18.7■□□□□ 0.58
CLPB-206ENST00000535990 ARHGAP10A1A4S6 786 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 MT-CYBP00156 380 aaPredicted RBP18.7■□□□□ 0.58
CLPB-206ENST00000535990 MMP3P08254 477 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 KCNE1P15382 129 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 TRIM25Q14258 630 aaKnown RBP18.7■□□□□ 0.58
CLPB-206ENST00000535990 CYTH1Q15438 398 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 EML3Q32P44 896 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 ZNF792Q3KQV3 632 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 ESRP1Q6NXG1 681 aaKnown RBP18.7■□□□□ 0.58
CLPB-206ENST00000535990 CNSTQ6PJW8 725 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 GPRIN1Q7Z2K8 1008 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 TXNDC5Q8NBS9 432 aaKnown RBP18.7■□□□□ 0.58
CLPB-206ENST00000535990 EDEM1Q92611 657 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 DCPSQ96C86 337 aaKnown RBP18.7■□□□□ 0.58
CLPB-206ENST00000535990 TBL1YQ9BQ87 522 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 TKTL2Q9H0I9 626 aa18.7■□□□□ 0.58
CLPB-206ENST00000535990 CNOT11Q9UKZ1 510 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms