RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 FOXC1Q12948 553 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 ELF2Q15723 593 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 TAZQ16635 292 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 NCBP2-AS2Q69YL0 99 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 KIAA1211LQ6NV74 962 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 C22orf39Q6P5X5 142 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 LRRC49Q8IUZ0 686 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 RCOR2Q8IZ40 523 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 PCDH20Q8N6Y1 951 aaKnown RBP12.91□□□□□ -0.34
DDB1-207ENST00000535967 UBL4BQ8N7F7 174 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 OR2T3Q8NH03 318 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 PCDH19Q8TAB3 1148 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.91□□□□□ -0.34
DDB1-207ENST00000535967 SLC39A8Q9C0K1 460 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 LZTFL1Q9NQ48 299 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 ETNK2Q9NVF9 386 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 RAD54BQ9Y620 910 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 NBEAQ8NFP9 2946 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 ITPR1Q14643 2758 aa12.91□□□□□ -0.34
DDB1-207ENST00000535967 FREM2Q5SZK8 3169 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 TTC34A8MYJ7 566 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 CDX4O14627 284 aaPredicted RBP12.9□□□□□ -0.34
DDB1-207ENST00000535967 ALOX15BO15296 676 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 MFSD11O43934 449 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 PRAMEF11O60813 436 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 ZRANB2O95218 330 aaKnown RBP eCLIP12.9□□□□□ -0.34
DDB1-207ENST00000535967 GABRG2P18507 467 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 CDKN2BP42772 138 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 MARCKSL1P49006 195 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 NUMBP49757 651 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 PAPOLAP51003 745 aaKnown RBP12.9□□□□□ -0.34
DDB1-207ENST00000535967 RWDD2BP57060 319 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 TFDP2Q14188 446 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 PPP2R5EQ16537 467 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 INO80DQ53TQ3 878 aaPredicted RBP12.9□□□□□ -0.34
DDB1-207ENST00000535967 TFDP3Q5H9I0 405 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 PMS2CLQ68D20 193 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 SLC9A4Q6AI14 798 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 ANO7Q6IWH7 933 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 SPOCD1Q6ZMY3 1216 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 NYAP1Q6ZVC0 841 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 ATP11CQ8NB49 1132 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 MDGA1Q8NFP4 955 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 TRIM58Q8NG06 486 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 FRS2Q8WU20 508 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 KRT35Q92764 455 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 ISG20Q96AZ6 181 aaKnown RBP12.9□□□□□ -0.34
DDB1-207ENST00000535967 CELF6Q96J87 481 aaKnown RBP12.9□□□□□ -0.34
DDB1-207ENST00000535967 ZNF599Q96NL3 588 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 SP110Q9HB58 689 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 PDFQ9HBH1 243 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 PRSS16Q9NQE7 514 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 BCCIPQ9P287 314 aaKnown RBP eCLIP12.9□□□□□ -0.34
DDB1-207ENST00000535967 SLCO3A1Q9UIG8 710 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 ADAMTS9Q9P2N4 1935 aa12.9□□□□□ -0.34
DDB1-207ENST00000535967 DFFAO00273 331 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 APOL1O14791 398 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 FTCDO95954 541 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 NDUFV2P19404 249 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 PTPN7P35236 360 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 CETN2P41208 172 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 COPAP53621 1224 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 ZBTB16Q05516 673 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 IL10RBQ08334 325 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 COL9A2Q14055 689 aaPredicted RBP12.89□□□□□ -0.35
DDB1-207ENST00000535967 ELAVL3Q14576 367 aaKnown RBP12.89□□□□□ -0.35
DDB1-207ENST00000535967 RFTN1Q14699 578 aaPredicted RBP12.89□□□□□ -0.35
DDB1-207ENST00000535967 DLG2Q15700 870 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 ACCSLQ4AC99 568 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 TMCO4Q5TGY1 634 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 ZNF776Q68DI1 518 aaPredicted RBP12.89□□□□□ -0.35
DDB1-207ENST00000535967 MFSD7Q6UXD7 560 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 LINGO4Q6UY18 593 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 DSG4Q86SJ6 1040 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 RFX6Q8HWS3 928 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 CCDC50Q8IVM0 306 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 ATPAF2Q8N5M1 289 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 PQLC3Q8N755 202 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 ZNF366Q8N895 744 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 HMGB4Q8WW32 186 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 PTPRN2Q92932 1015 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 HES6Q96HZ4 224 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 ZNF830Q96NB3 372 aaPredicted RBP12.89□□□□□ -0.35
DDB1-207ENST00000535967 MAK16Q9BXY0 300 aaKnown RBP12.89□□□□□ -0.35
DDB1-207ENST00000535967 RSPH9Q9H1X1 276 aaPredicted RBP12.89□□□□□ -0.35
DDB1-207ENST00000535967 UBA2Q9UBT2 640 aaPredicted RBP12.89□□□□□ -0.35
DDB1-207ENST00000535967 SCML1Q9UN30 329 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 EFR3BQ9Y2G0 817 aa12.89□□□□□ -0.35
DDB1-207ENST00000535967 hCG_1818297A0A087WSY0 165 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 GOLGA6L9A6NEM1 432 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 RNASEH1O60930 286 aaKnown RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 SIN3BO75182 1162 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 ZNF217O75362 1048 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 RHOBTB1O94844 696 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 CD160O95971 181 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 GSRP00390 522 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 MT-CO1P00395 513 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 MX2P20592 715 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 TGM2P21980 687 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 PEX5P50542 639 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms