RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 GSDMDP57764 484 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 SHBQ15464 509 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 ZNF423Q2M1K9 1284 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 TBC1D3GQ6DHY5 549 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 TBC1D3CQ6IPX1 549 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 RFX8Q6ZV50 586 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 ERN2Q76MJ5 926 aaKnown RBP16.66■□□□□ 0.26
ATL3-202ENST00000535789 TBC1D3Q8IZP1 549 aaPredicted RBP16.66■□□□□ 0.26
ATL3-202ENST00000535789 NIPA2Q8N8Q9 360 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 OR2AP1Q8NGE2 309 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 BAHD1Q8TBE0 780 aaPredicted RBP16.66■□□□□ 0.26
ATL3-202ENST00000535789 HEPHQ9BQS7 1158 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 HDAC8Q9BY41 377 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 SLC39A8Q9C0K1 460 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 CATSPERBQ9H7T0 1116 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 MRPL47Q9HD33 250 aaKnown RBP16.66■□□□□ 0.26
ATL3-202ENST00000535789 ETNK2Q9NVF9 386 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 HECAQ9UBI9 543 aaPredicted RBP16.66■□□□□ 0.26
ATL3-202ENST00000535789 BTBD3Q9Y2F9 522 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 MYLKQ15746 1914 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 FREM2Q5SZK8 3169 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 VILLO15195 856 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 INSIG1O15503 277 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 PRPSAP2O60256 369 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 RNGTTO60942 597 aaKnown RBP16.65■□□□□ 0.26
ATL3-202ENST00000535789 RNF8O76064 485 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 CER1O95813 267 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 ZNF883P0CG24 379 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 ADRB3P13945 408 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 ERCC2P18074 760 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 HTR7P34969 479 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 PCK1P35558 622 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 DEKP35659 375 aaKnown RBP16.65■□□□□ 0.26
ATL3-202ENST00000535789 YBEYP58557 167 aaPredicted RBP16.65■□□□□ 0.26
ATL3-202ENST00000535789 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
ATL3-202ENST00000535789 FGL2Q14314 439 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 CYTH1Q15438 398 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 DPYSL2Q16555 572 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 ZNF284Q2VY69 593 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 PARP15Q460N3 678 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 TMEM259Q4ZIN3 620 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 PPP6R3Q5H9R7 873 aaPredicted RBP16.65■□□□□ 0.26
ATL3-202ENST00000535789 CCDC122Q5T0U0 273 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 SEL1L3Q68CR1 1132 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 NAPEPLDQ6IQ20 393 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 SPATS2Q86XZ4 545 aaKnown RBP16.65■□□□□ 0.26
ATL3-202ENST00000535789 CNGA4Q8IV77 575 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 NAXDQ8IW45 347 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 PLPP6Q8IY26 295 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 TMEM145Q8NBT3 493 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 KLK6Q92876 244 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 SERAC1Q96JX3 654 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 EXOC2Q96KP1 924 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 CHP1Q99653 195 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 PREBQ9HCU5 417 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 FZD3Q9NPG1 666 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 TM7SF3Q9NS93 570 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 ABHD10Q9NUJ1 306 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 ANAPC7Q9UJX3 599 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 ITM2BQ9Y287 266 aa16.65■□□□□ 0.26
ATL3-202ENST00000535789 A0A1W2PQU0 124 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 EIF3CLB5ME19 914 aaKnown RBP16.64■□□□□ 0.25
ATL3-202ENST00000535789 BUB1O43683 1085 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 TPM1P09493 284 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 RARAP10276 462 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 PRLRP16471 622 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 CD38P28907 300 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 RECQLP46063 649 aaPredicted RBP16.64■□□□□ 0.25
ATL3-202ENST00000535789 RGRP47804 291 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 NEK3P51956 506 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 IL9RQ01113 521 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 SLC14A1Q13336 389 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 TEAD4Q15561 434 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 SLC18A3Q16572 532 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 LRRC73Q5JTD7 316 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 PRAMEF14Q5SWL7 426 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 DBX2Q6ZNG2 339 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 ZNF354CQ86Y25 554 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 TSC1Q92574 1164 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 NSMCE3Q96MG7 304 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 EIF3CQ99613 913 aaKnown RBP16.64■□□□□ 0.25
ATL3-202ENST00000535789 MYOCQ99972 504 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 ZWILCHQ9H900 591 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.64■□□□□ 0.25
ATL3-202ENST00000535789 FARP1Q9Y4F1 1045 aaPredicted RBP16.64■□□□□ 0.25
ATL3-202ENST00000535789 FADS3Q9Y5Q0 445 aa16.64■□□□□ 0.25
ATL3-202ENST00000535789 COL27A1Q8IZC6 1860 aaPredicted RBP16.63■□□□□ 0.25
ATL3-202ENST00000535789 ZSCAN5CA6NGD5 496 aaPredicted RBP16.63■□□□□ 0.25
ATL3-202ENST00000535789 PRAMEF11O60813 436 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 UGT2B4P06133 528 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 CD48P09326 243 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 DESP17661 470 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 FECHP22830 423 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 PAPOLAP51003 745 aaKnown RBP16.63■□□□□ 0.25
ATL3-202ENST00000535789 NDST2P52849 883 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 GEMIN4P57678 1058 aaKnown RBP16.63■□□□□ 0.25
ATL3-202ENST00000535789 NXPH1P58417 271 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 INO80DQ53TQ3 878 aaPredicted RBP16.63■□□□□ 0.25
ATL3-202ENST00000535789 IL27RAQ6UWB1 636 aa16.63■□□□□ 0.25
ATL3-202ENST00000535789 KDM7AQ6ZMT4 941 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms