RNA–Protein interactions for RNA: ENST00000535765.5

VPS37B-203, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-203ENST00000535765 TBC1D3EA0A087X179 549 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 TBC1D3KA0A087X1G2 549 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 TBC1D3FA6NER0 549 aaPredicted RBP23.82■■□□□ 1.4
VPS37B-203ENST00000535765 PCNX2A6NKB5 2137 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 TBC1D3LB9A6J9 549 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 KRT7P08729 469 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 TBC1D3HP0C7X1 549 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 ITGB7P26010 798 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 CSNK1EP49674 416 aaKnown RBP23.82■■□□□ 1.4
VPS37B-203ENST00000535765 ARSEP51690 589 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 PDK2Q15119 407 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 MYLK3Q32MK0 819 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 N4BP2L1Q5TBK1 243 aaPredicted RBP23.82■■□□□ 1.4
VPS37B-203ENST00000535765 TBC1D3GQ6DHY5 549 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 TBC1D3CQ6IPX1 549 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 ERN2Q76MJ5 926 aaKnown RBP23.82■■□□□ 1.4
VPS37B-203ENST00000535765 TRIM69Q86WT6 500 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 TBC1D3Q8IZP1 549 aaPredicted RBP23.82■■□□□ 1.4
VPS37B-203ENST00000535765 ARRDC3Q96B67 414 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 CELF6Q96J87 481 aaKnown RBP23.82■■□□□ 1.4
VPS37B-203ENST00000535765 OSBPL1AQ9BXW6 950 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 TM6SF2Q9BZW4 377 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 SLC32A1Q9H598 525 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 DNAAF2Q9NVR5 837 aaKnown RBP23.82■■□□□ 1.4
VPS37B-203ENST00000535765 UBA2Q9UBT2 640 aaPredicted RBP23.82■■□□□ 1.4
VPS37B-203ENST00000535765 NCOR2Q9Y618 2525 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 ANKRD36A6QL64 1941 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 CABIN1Q9Y6J0 2220 aa23.82■■□□□ 1.4
VPS37B-203ENST00000535765 A0A1B0GVT2 93 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 PLK4O00444 970 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 CEACAM1P13688 526 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 AMPD1P23109 780 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 IL4RP24394 825 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 GRIA4P48058 902 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 CDH6P55285 790 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 TAS2R38P59533 333 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 RACK1P63244 317 aaKnown RBP23.81■■□□□ 1.4
VPS37B-203ENST00000535765 RAD51Q06609 339 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 RFTN1Q14699 578 aaPredicted RBP23.81■■□□□ 1.4
VPS37B-203ENST00000535765 IL27RAQ6UWB1 636 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 TMCO3Q6UWJ1 677 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 NPWQ8N729 165 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 DEFB124Q8NES8 71 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 GRIN3AQ8TCU5 1115 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 VOPP1Q96AW1 172 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 GDAP1L1Q96MZ0 367 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 CPEB1Q9BZB8 566 aaKnown RBP23.81■■□□□ 1.4
VPS37B-203ENST00000535765 SPTBN2O15020 2390 aa23.81■■□□□ 1.4
VPS37B-203ENST00000535765 J3KR12 359 aa23.8■■□□□ 1.4
VPS37B-203ENST00000535765 GIPC1O14908 333 aa23.8■■□□□ 1.4
VPS37B-203ENST00000535765 IGSF6O95976 241 aa23.8■■□□□ 1.4
VPS37B-203ENST00000535765 SERPINB6P35237 376 aa23.8■■□□□ 1.4
VPS37B-203ENST00000535765 CYLC1P35663 651 aaPredicted RBP23.8■■□□□ 1.4
VPS37B-203ENST00000535765 SSR1P43307 286 aaKnown RBP23.8■■□□□ 1.4
VPS37B-203ENST00000535765 HADHBP55084 474 aaKnown RBP23.8■■□□□ 1.4
VPS37B-203ENST00000535765 IL10RBQ08334 325 aa23.8■■□□□ 1.4
VPS37B-203ENST00000535765 KRT81Q14533 505 aa23.8■■□□□ 1.4
VPS37B-203ENST00000535765 GRM3Q14832 879 aa23.8■■□□□ 1.4
VPS37B-203ENST00000535765 CYTH1Q15438 398 aa23.8■■□□□ 1.4
VPS37B-203ENST00000535765 LEKR1Q6ZMV7 388 aa23.8■■□□□ 1.4
VPS37B-203ENST00000535765 ADAT2Q7Z6V5 191 aaKnown RBP23.8■■□□□ 1.4
VPS37B-203ENST00000535765 MAP7D3Q8IWC1 876 aa23.8■■□□□ 1.4
VPS37B-203ENST00000535765 ZDHHC6Q9H6R6 413 aa23.8■■□□□ 1.4
VPS37B-203ENST00000535765 TMEM131Q92545 1883 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 UPK3BL1B0FP48 263 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 UPK3BL2E5RIL1 263 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 RNF103O00237 685 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 CER1O95813 267 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 CDC25BP30305 580 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 MAGEA1P43355 309 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 CSNK1DP48730 415 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 NEK3P51956 506 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 TAS2R40P59535 323 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 RHOAP61586 193 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 SLC14A1Q13336 389 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 MESDQ14696 234 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 ZNF805Q5CZA5 627 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 TMCO4Q5TGY1 634 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 PRPF39Q86UA1 669 aaKnown RBP23.79■■□□□ 1.4
VPS37B-203ENST00000535765 TMTC1Q8IUR5 882 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 LRRC49Q8IUZ0 686 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 RAB7BQ96AH8 199 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 ZNF599Q96NL3 588 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 ZNF670Q9BS34 389 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 GAREM1Q9H706 876 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 EBF2Q9HAK2 575 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 LUC7LQ9NQ29 371 aaKnown RBP23.79■■□□□ 1.4
VPS37B-203ENST00000535765 LHX3Q9UBR4 397 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 DMTF1Q9Y222 760 aa23.79■■□□□ 1.4
VPS37B-203ENST00000535765 KRIT1O00522 736 aa23.78■■□□□ 1.4
VPS37B-203ENST00000535765 AP1G1O43747 822 aa23.78■■□□□ 1.4
VPS37B-203ENST00000535765 GJB3O75712 270 aa23.78■■□□□ 1.4
VPS37B-203ENST00000535765 SLC1A1P43005 524 aa23.78■■□□□ 1.4
VPS37B-203ENST00000535765 BNC1Q01954 994 aa23.78■■□□□ 1.4
VPS37B-203ENST00000535765 NSUN2Q08J23 767 aaKnown RBP eCLIP23.78■■□□□ 1.4
VPS37B-203ENST00000535765 DPYSL3Q14195 570 aa23.78■■□□□ 1.4
VPS37B-203ENST00000535765 SPA17Q15506 151 aa23.78■■□□□ 1.4
VPS37B-203ENST00000535765 KIF19Q2TAC6 998 aa23.78■■□□□ 1.4
VPS37B-203ENST00000535765 HLA-BQ31612 363 aa23.78■■□□□ 1.4
VPS37B-203ENST00000535765 PIP4P1Q86T03 277 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms