RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 TRNP1Q6NT89 227 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 LVRNQ6Q4G3 990 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 ZNF843Q8N446 348 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 ZNF548Q8NEK5 533 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 BTN2A2Q8WVV5 523 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 SPOCK2Q92563 424 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 PRR11Q96HE9 360 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 TBCBQ99426 244 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 OSBPL1AQ9BXW6 950 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 STK33Q9BYT3 514 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 SIK2Q9H0K1 926 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 MAGEH1Q9H213 219 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 NDST4Q9H3R1 872 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 PLCB1Q9NQ66 1216 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 TMEM248Q9NWD8 314 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 DKK3Q9UBP4 350 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 AJAP1Q9UKB5 411 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 CA5BQ9Y2D0 317 aa11.42□□□□□ -0.58
CLSTN3-206ENST00000535668 HECTD1Q9ULT8 2610 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 ZSCAN5CA6NGD5 496 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 H3BM21 787 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 BIN1O00499 593 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 SPINT1O43278 529 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 SDC3O75056 442 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 CYP1A1P04798 512 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 RHOQP17081 205 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 MMP8P22894 467 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 ADRA1BP35368 520 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 PEX5P50542 639 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 CCNHP51946 323 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 TMPRSS3P57727 454 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 NOMO3P69849 1222 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 DAB2P98082 770 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 APBA1Q02410 837 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 CCDC157Q569K6 752 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 ZNF805Q5CZA5 627 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 XKR5Q6UX68 686 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 STRADAQ7RTN6 431 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 FAM114A1Q8IWE2 563 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 ARHGEF2Q92974 986 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 NAT6Q93015 286 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 NTAN1Q96AB6 310 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 CCDC97Q96F63 343 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 DCBLD2Q96PD2 775 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 CPEB1Q9BZB8 566 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 SYNCQ9H7C4 482 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 THSD1Q9NS62 852 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 MPP6Q9NZW5 540 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 KLF15Q9UIH9 416 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 PCDHB1Q9Y5F3 818 aa11.41□□□□□ -0.58
CLSTN3-206ENST00000535668 A0A1W2PNU3 283 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 C16orf96A6NNT2 1141 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 NTN3O00634 580 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 FPGTO14772 594 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 RAD51BO15315 384 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 AQP9O43315 295 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 GADD45BO75293 160 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 PCDH8O95206 1070 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 POP4O95707 220 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 PAK4O96013 591 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 PLA2G2AP14555 144 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 UCHL3P15374 230 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 USP8P40818 1118 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 SULT1E1P49888 294 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 CLDN2P57739 230 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 UBE2HP62256 183 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 EIF2B5Q13144 721 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 DRAP1Q14919 205 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 VWA3BQ502W6 1294 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 FAM102AQ5T9C2 384 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 PARS2Q7L3T8 475 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 PASD1Q8IV76 773 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 MSANTD4Q8NCY6 345 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 OR7D4Q8NG98 312 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 OR2AP1Q8NGE2 309 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 EPS8L1Q8TE68 723 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 TTC9Q92623 222 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 B3GNT4Q9C0J1 378 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 ATP13A1Q9HD20 1204 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 OR12D3Q9UGF7 316 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 PCDHGA7Q9Y5G6 932 aa11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 UBR5O95071 2799 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-206ENST00000535668 LRRK2Q5S007 2527 aa11.4□□□□□ -0.59
CLSTN3-206ENST00000535668 SYNJ2BP-COX16A0A087WUM0 186 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 TSPAN11A1L157 253 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 CFAP69A5D8W1 941 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 C2CD4BA6NLJ0 364 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 TMEM110-MUSTN1A8MSY1 372 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 WASH4PA8MWX3 477 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 F8VZ95 297 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 USP12O75317 370 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 CSO75390 466 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 GGCXP38435 758 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 RPIAP49247 311 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 AIF1P55008 147 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 YBEYP58557 167 aaPredicted RBP11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 SNRPD1P62314 119 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 EIF3IQ13347 325 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 PTK2BQ14289 1009 aa11.39□□□□□ -0.59
CLSTN3-206ENST00000535668 MYLK3Q32MK0 819 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms