RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	TRPM5	Q9NZQ8	1165 aa		4.97	□□□□□ -1.61
ECHDC1-223	ENST00000534442	LPAR3	Q9UBY5	353 aa		4.97	□□□□□ -1.61
ECHDC1-223	ENST00000534442	ZNF69	Q9UC07	566 aa		4.97	□□□□□ -1.61
ECHDC1-223	ENST00000534442	VPS51	Q9UID3	782 aa		4.97	□□□□□ -1.61
ECHDC1-223	ENST00000534442	KCNE5	Q9UJ90	142 aa		4.97	□□□□□ -1.61
ECHDC1-223	ENST00000534442	SSX2IP	Q9Y2D8	614 aa		4.97	□□□□□ -1.61
ECHDC1-223	ENST00000534442	NEU2	Q9Y3R4	380 aa		4.97	□□□□□ -1.61
ECHDC1-223	ENST00000534442	TACC2	O95359	2948 aa		4.97	□□□□□ -1.61
ECHDC1-223	ENST00000534442	ACAN	P16112	2415 aa		4.96	□□□□□ -1.61
ECHDC1-223	ENST00000534442	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.96	□□□□□ -1.61
ECHDC1-223	ENST00000534442	MYH7B	A7E2Y1	1941 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	KRTAP23-1	A1A580	65 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	DBX1	A6NMT0	343 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	MARCH11	A6NNE9	402 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	AGPS	O00116	658 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	EIF3F	O00303	357 aa	Predicted RBP	4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PLK4	O00444	970 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	FCHO1	O14526	889 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	TRIM24	O15164	1050 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	DHH	O43323	396 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	KCNAB3	O43448	404 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	DNPH1	O43598	174 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	RGS10	O43665	173 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ZNF623	O75123	536 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ERN1	O75460	977 aa	Known RBP	4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	USP1	O94782	785 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PAPSS2	O95340	614 aa	Predicted RBP	4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CFI	P05156	583 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	RNF224	P0DH78	156 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	HGF	P14210	728 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PPIF	P30405	207 aa	Known RBP	4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PRKAR2B	P31323	418 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	NPTX2	P47972	431 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PRKAG1	P54619	331 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	LMAN2	Q12907	356 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ATP1A4	Q13733	1029 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ICAM4	Q14773	271 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CYP2A13	Q16696	494 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	GEN1	Q17RS7	908 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ABLIM2	Q6H8Q1	611 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	FOXR2	Q6PJQ5	311 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	GATAD2A	Q86YP4	633 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	THNSL1	Q8IYQ7	743 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CHST13	Q8NET6	341 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SCAMP5	Q8TAC9	235 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	TMEM171	Q8WVE6	324 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SLC25A32	Q9H2D1	315 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PABPC3	Q9H361	631 aa	Known RBP	4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	TP63	Q9H3D4	680 aa	Predicted RBP	4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	EPS8L2	Q9H6S3	715 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	DNAJC18	Q9H819	358 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SFXN1	Q9H9B4	322 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	LMAN1L	Q9HAT1	526 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CD248	Q9HCU0	757 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	C2orf42	Q9NWW7	574 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	MAP3K2	Q9Y2U5	619 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	DDX49	Q9Y6V7	483 aa	Known RBP	4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	FPGT-TNNI3K	V9GXZ4	949 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	BIRC6	Q9NR09	4857 aa		4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442	MN1	Q10571	1320 aa	Predicted RBP	4.96	□□□□□ -1.62
ECHDC1-223	ENST00000534442		A0A1B0GVC2	190 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ANKRD18B	A2A2Z9	1011 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442		B9A039	149 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442		F5H697	171 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	IRAK2	O43187	625 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	FLOT1	O75955	427 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SCAF4	O95104	1147 aa	Known RBP	4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	GH2	P01242	217 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ITGA2B	P08514	1039 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CKMT1A	P12532	417 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	LAMP2	P13473	410 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ENG	P17813	658 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	GATA3	P23771	443 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	NTSR1	P30989	418 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CA8	P35219	290 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	THPO	P40225	353 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	RPS7	P62081	194 aa	Known RBP	4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SP2	Q02086	613 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	CNGB1	Q14028	1251 aa	Predicted RBP	4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	E2F2	Q14209	437 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	HLX	Q14774	488 aa	Predicted RBP	4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SPOUT1	Q5T280	376 aa	Known RBP	4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	RBM20	Q5T481	1227 aa	Known RBP	4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SPNS3	Q6ZMD2	512 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SPART	Q8N0X7	666 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SPEM1	Q8N4L4	309 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	SSC4D	Q8WTU2	575 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	STAM	Q92783	540 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	FGF14	Q92915	247 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	TMEM125	Q96AQ2	219 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ZDHHC12	Q96GR4	267 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ZBTB45	Q96K62	511 aa	Predicted RBP	4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	ZCCHC4	Q9H5U6	513 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PRDM8	Q9NQV8	689 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	HEBP1	Q9NRV9	189 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PDP2	Q9P2J9	529 aa		4.95	□□□□□ -1.62
ECHDC1-223	ENST00000534442	DNAJB11	Q9UBS4	358 aa		4.95	□□□□□ -1.62

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