RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 YBX3P16989 372 aaKnown RBP eCLIP19.59■□□□□ 0.735e-7■■□□□ 12.9
CAPN1-226ENST00000533820 PTPN1P18031 435 aaKnown RBP19.59■□□□□ 0.73
CAPN1-226ENST00000533820 CDKL1Q00532 357 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 CYTH1Q15438 398 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 ZNF423Q2M1K9 1284 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 LIPMQ5VYY2 423 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 C16orf87Q6PH81 154 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 C16orf89Q6UX73 402 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 ARRDC4Q8NCT1 418 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 KLHL32Q96NJ5 620 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 TMEM30AQ9NV96 361 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 SLC2A6Q9UGQ3 507 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 CIDEBQ9UHD4 219 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 GNEQ9Y223 722 aaKnown RBP19.59■□□□□ 0.73
CAPN1-226ENST00000533820 TMEM114B3SHH9 223 aa19.58■□□□□ 0.73
CAPN1-226ENST00000533820 SLC35E2BP0CK96 405 aa19.58■□□□□ 0.73
CAPN1-226ENST00000533820 SMIM18P0DKX4 95 aa19.58■□□□□ 0.73
CAPN1-226ENST00000533820 PPARGP37231 505 aaPredicted RBP19.58■□□□□ 0.73
CAPN1-226ENST00000533820 DGKDQ16760 1214 aa19.58■□□□□ 0.73
CAPN1-226ENST00000533820 ANO4Q32M45 955 aa19.58■□□□□ 0.73
CAPN1-226ENST00000533820 ZNF362Q5T0B9 420 aaPredicted RBP19.58■□□□□ 0.73
CAPN1-226ENST00000533820 TRIM67Q6ZTA4 783 aa19.58■□□□□ 0.73
CAPN1-226ENST00000533820 ZC3HC1Q86WB0 502 aaKnown RBP19.58■□□□□ 0.73
CAPN1-226ENST00000533820 CLIP3Q96DZ5 547 aa19.58■□□□□ 0.73
CAPN1-226ENST00000533820 DRC3Q9H069 523 aa19.58■□□□□ 0.73
CAPN1-226ENST00000533820 ADAMTS10Q9H324 1103 aa19.58■□□□□ 0.73
CAPN1-226ENST00000533820 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.58■□□□□ 0.73
CAPN1-226ENST00000533820 PPP2R3BQ9Y5P8 575 aa19.58■□□□□ 0.73
CAPN1-226ENST00000533820 TLL2Q9Y6L7 1015 aa19.58■□□□□ 0.73
CAPN1-226ENST00000533820 KCNU1A8MYU2 1149 aa19.58■□□□□ 0.72
CAPN1-226ENST00000533820 TSPAN8P19075 237 aa19.58■□□□□ 0.72
CAPN1-226ENST00000533820 CCR3P51677 355 aa19.58■□□□□ 0.72
CAPN1-226ENST00000533820 GSTM4Q03013 218 aa19.58■□□□□ 0.72
CAPN1-226ENST00000533820 HSPBAP1Q96EW2 488 aa19.58■□□□□ 0.72
CAPN1-226ENST00000533820 CHST12Q9NRB3 414 aa19.58■□□□□ 0.72
CAPN1-226ENST00000533820 MEIS3P2A8K0S8 358 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 RALGDSQ12967 914 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 ESRP1Q6NXG1 681 aaKnown RBP19.57■□□□□ 0.72
CAPN1-226ENST00000533820 ZYG11AQ6WRX3 759 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 CENPLQ8N0S6 344 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-226ENST00000533820 LSMEM2Q8N112 164 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 TMEM151AQ8N4L1 468 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 ATP6V1E2Q96A05 226 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 MROH8Q9H579 483 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 OR12D3Q9UGF7 316 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 COPG1Q9Y678 874 aaKnown RBP19.57■□□□□ 0.72
CAPN1-226ENST00000533820 CASQ2O14958 399 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-226ENST00000533820 TFAP2AP05549 437 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 SMPD1P17405 629 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 CCNA1P78396 465 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 SEPT6Q14141 434 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 GRM2Q14416 872 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 NADK2Q4G0N4 442 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 PIGGQ5H8A4 983 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 METTL21CQ5VZV1 264 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 CYP2R1Q6VVX0 501 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 METTL25Q8N6Q8 603 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 TKTL2Q9H0I9 626 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 GBA3Q9H227 469 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 A0A0G2JMZ2 1700 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 LRRC37A2A6NM11 1700 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 C9IYK1 514 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 AURKAO14965 403 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 PMPCBO75439 489 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 CYP2C9P11712 490 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 HOXD11P31277 338 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-226ENST00000533820 GJA9P57773 515 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 ADGRE1Q14246 886 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 PDZD4Q76G19 769 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-226ENST00000533820 MFSD6LQ8IWD5 586 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 NLGN2Q8NFZ4 835 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 OR6J1Q8NGC5 347 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 ZNF560Q96MR9 790 aa19.57■□□□□ 0.72
CAPN1-226ENST00000533820 WDR6Q9NNW5 1121 aaKnown RBP19.57■□□□□ 0.72
CAPN1-226ENST00000533820 HTR3EA5X5Y0 456 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 DDHD2O94830 711 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 PGK1P00558 417 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 ME2P23368 584 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 PRDX6P30041 224 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 NOMO2Q5JPE7 1267 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 PRAMEF19Q5SWL8 479 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 KCTD11Q693B1 232 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 CNTD1Q8N815 330 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 RP9Q8TA86 221 aaKnown RBP19.56■□□□□ 0.72
CAPN1-226ENST00000533820 SLC16A10Q8TF71 515 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 ELMO2Q96JJ3 720 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 C6orf203Q9P0P8 240 aaPredicted RBP19.56■□□□□ 0.72
CAPN1-226ENST00000533820 ACOT9Q9Y305 439 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 LOC285556D6RIA3 1793 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 MYBPHLA2RUH7 354 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 LRIG2O94898 1065 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 CD4P01730 458 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 AFF1P51825 1210 aaKnown RBP19.56■□□□□ 0.72
CAPN1-226ENST00000533820 PPIDQ08752 370 aaKnown RBP19.56■□□□□ 0.72
CAPN1-226ENST00000533820 PRKAA1Q13131 559 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 SMUG1Q53HV7 270 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 LRRC8EQ6NSJ5 796 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 ZNF410Q86VK4 478 aa19.56■□□□□ 0.72
CAPN1-226ENST00000533820 HNRNPABQ99729 332 aaKnown RBP19.56■□□□□ 0.72
CAPN1-226ENST00000533820 C1QTNF1Q9BXJ1 281 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms